Return to main results Retrieve Phyre Job Id

Job DescriptionP39359
Confidence84.14%DateThu Jan 5 11:59:49 GMT 2012
Rank285Aligned Residues177
% Identity14%Templatec3ct7E_
PDB info PDB header:isomeraseChain: E: PDB Molecule:d-allulose-6-phosphate 3-epimerase; PDBTitle: crystal structure of d-allulose 6-phosphate 3-epimerase2 from escherichia coli k-12
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.... .....50.........60.........70.........80.........90......
Predicted Secondary structure 







...















Query SS confidence 
























. . .



















































Query Sequence  TLDKKAMREVADFLINKGVDGLFYL. . . GTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVGSPSTDEAVKLAQHAQA
Query Conservation   

       
  
   

 

   ...




   

 


  
             

 

   

   
  
  
  
Alig confidence 













.









...









....








..














...








Template Conservation 
 
   
   
   .  
 
 




 

 


 
  
....   
  

 ..     
 


 
  
...   
     
Template Sequence  CMDLLKFKEQIEFI. DSHADYFHIDIMDGHFVPNLTLS. . . . PFFVSQVKK. . LATKPLDCHLMVTRP. . . QDYIAQLAR
Template Known Secondary structure  GS
GGG.TT
S

SSSSS


B
....T..T

S
SS
G...GGT
Template Predicted Secondary structure 

.













....
..






...
Template SS confidence 















































































   910.........20.. .......30.........40..... ....50.... .....60......... 70........
 
   97..100.........110.........120.........130.........140.........150.........160 .......
Predicted Secondary structure 





























.........



Query SS confidence 































































. . . . . . . . .






Query Sequence  YGADGIVAINPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENI. . . . . . . . . VGIKDTI
Query Conservation   




    
 
   
   
      

 
   





 
  

  
    
  
    
 
......... 


 
 
Alig confidence 











....











.













.....















.........






Template Conservation 



 
 

 
 ....        
   .   
    
 
 
 .....
  
     
   
 
  


  
  

    
Template Sequence  AGADFITLHPET. . . . INGQAFRLIDEI. RRHDMKVGLILNPE. . . . . TPVEAMKYYIHKADKITVMTVDPGFAGQPFIP
Template Known Secondary structure  T
S
GGG....
TTT.TT

TT.....

GGGGTTTGGG
SSS
TT
SS



T
Template Predicted Secondary structure 







....

.





.....













Template SS confidence 















































































   7980.........90 .........100.. .......110...... ...120.........130.........140........
 
   168.170.........180... ......190.... .....200.........210......
Predicted Secondary structure 


..




.


Query SS confidence 















. .










.





















Query Sequence  DSVGHLRTMINTVKSV. . RPSFSVFCGYD. DHLLNTMLLGGDGAITASANFA
Query Conservation                  ..     
  
 
.      
  
  
 

   
  
Alig confidence 















..










.





















Template Conservation      

  
            
 




  
 
      


 





 
 
Template Sequence  EMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGLF
Template Known Secondary structure  TT


S

STTTT


TTTTG
Template Predicted Secondary structure 















Template SS confidence 



















































   149150.........160.........170.........180.........190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions