Job Description P39359 Confidence 91.69% Date Thu Jan 5 11:59:49 GMT 2012 Rank 200 Aligned Residues 157 % Identity 13% Template c3c52B_ PDB info PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.						.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																												.													.	.	.	.	.
Query SS confidence																																												.													.	.	.	.	.
Query Sequence		E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	.	D	G	R	V	P	V	L	I	G	V	G	S	.	.	.	.	.	P	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G
Query Conservation																																												.													.	.	.	.	.
Alig confidence																						.	.	.	.	.																		.													.	.	.	.	.												.	.	.
Template Conservation																						.	.	.	.	.																																															.	.	.
Template Sequence		E	S	C	E	K	A	V	K	A	G	F	T	S	V	M	I	D	A	S	H	.	.	.	.	.	H	A	F	E	E	N	L	E	L	T	S	K	V	V	K	M	A	H	N	A	G	V	S	V	E	A	E	L	G	R	L	M	G	I	L	V	N	P	K	E	A	E	Q	F	V	K	.	.	.	E	S	Q	V	D	Y
Template Known Secondary structure											T		S							T	T	.	.	.	.	.	S																			T	T								S																		.	.	.					S
Template Predicted Secondary structure																						.	.	.	.	.																																															.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.
		102	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		I	V	A	I	N	.	.	.	.	.	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	E	N	I	V	G	I	K	D	T	I	D	S	V	G	H	L	R	T	M
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.																															.	.	.	.	.																													.	.	.	.	.
Template Conservation																																										.	.	.	.	.																													.	.	.	.	.
Template Sequence		L	A	P	A	I	G	T	S	H	G	A	F	K	F	K	G	E	P	K	L	D	F	E	R	L	Q	E	V	K	R	L	T	N	I	P	L	V	L	H	G	.	.	.	.	.	A	S	A	I	P	D	N	V	R	K	S	Y	L	D	A	G	G	D	L	K	G	S	K	G	V	P	F	E	.	.	.	.	.	F	L
Template Known Secondary structure						S	S			S	S	S	B			S	S	S																	S						S	.	.	.	.	.															T	T				T	T		B						.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.																													.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	T	V	K	S	V	R	P	S	F	S	V	F	C	G	Y	D	D	H	L	L	N	T	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	S	V	K	G	G	I	N	K	V	N	T	D	T	D	L	R	I	A	F	I	A	E	V	R
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions