Job Description P39359 Confidence 65.93% Date Thu Jan 5 11:59:49 GMT 2012 Rank 413 Aligned Residues 199 % Identity 15% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		M	K	K	F	S	G	I	I	P	P	V	S	.	.	.	.	.	S	T	F	H	R	D	G	T	L	D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V
Query Conservation														.	.	.	.	.
Alig confidence							.							.	.	.	.	.			.	.	.																												.	.	.	.	.
Template Conservation							.														.	.	.																												.	.	.	.	.
Template Sequence		M	R	E	W	K	.	I	I	D	S	T	L	R	E	G	E	Q	F	E	.	.	.	K	A	N	F	S	T	Q	D	K	V	E	I	A	K	A	L	D	E	F	G	I	E	Y	I	E	V	T	.	.	.	.	.	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T
Template Known Secondary structure							.							T	G	G	G	G	S	T	.	.	.	T																			T		S						.	.	.	.	.		G	G	G														S			S	S
Template Predicted Secondary structure							.														.	.	.																												.	.	.	.	.
Template SS confidence
		1	.	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150
Predicted Secondary structure																																																		.	.	.	.																									.
Query SS confidence																																																		.	.	.	.																									.
Query Sequence		L	I	G	V	G	S	P	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	.	.	.	.	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	.	E	T	V
Query Conservation																																																		.	.	.	.																									.
Alig confidence							.	.	.	.	.	.	.																																					.	.	.	.																									.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		H	I	Q	C	R	.	.	.	.	.	.	.	L	D	A	A	K	V	A	V	E	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I	I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	R	S	E	E	Q	D	L	L	A	V
Template Known Secondary structure					S		.	.	.	.	.	.	.										T	T		S								S																									T	T	S							S	S	T	T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																			.	.																	.							.	.	.	.	.	.	.
Query SS confidence																			.	.																	.							.	.	.	.	.	.	.
Query Sequence		T	R	L	A	L	Q	N	E	N	I	V	G	I	K	D	T	I	.	.	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	.	R	P	S	F	S	V	.	.	.	.	.	.	.	F	C	G	Y	D	D	H	L	L	N	T	M	L	L	G	G	D	G	A	I	T	A	S	A	N	F
Query Conservation																			.	.																	.							.	.	.	.	.	.	.
Alig confidence																			.	.																	.							.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	E	A	V	A	P	Y	V	D	R	V	G	L	A	D	T	V	G	V	A	T	P	R	Q	V	Y	A	L	V	R	E	V	R	R	V	V	G	P	R	V	D	I	E	F	H	G	H	N	D	T	G	C	A	I	A	N	A	Y	E	A	I	E	A	G	A	T	H	V	D	T	T	I	L	G	I
Template Known Secondary structure						G	G	G		S							T	T	S																			T	T	T	S							B		T	T	S												T	T							B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions