Job Description P39359 Confidence 100.00% Date Thu Jan 5 11:59:49 GMT 2012 Rank 17 Aligned Residues 288 % Identity 31% Template c2yxgD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihyrodipicolinate synthase (dapa) Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	G	I	I	P	P	V	S	S	T	F	H	R	D	G	T	L	D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	P	S
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		F	K	G	V	Y	P	A	I	I	T	P	F	K	.	N	K	E	V	D	F	D	G	L	E	E	N	I	N	F	L	I	E	N	G	V	S	G	I	V	A	V	G	T	T	G	E	S	P	T	L	S	H	E	E	H	K	K	V	I	E	K	V	V	D	V	V	N	G	R	V	Q	V	I	A	G	A	G	S	N	C
Template Known Secondary structure								B							.	T	T																	T	T		S					S	S	T	T	T	T	G	G	G	S																	T	T	S	S									S	S
Template Predicted Secondary structure															.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	E	N	I	V	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	E	A	I	E	L	S	V	F	A	E	D	V	G	A	D	A	V	L	S	I	T	P	Y	Y	N	K	P	T	Q	E	G	L	R	K	H	F	G	K	V	A	E	S	I	N	L	P	I	V	L	Y	N	V	P	S	R	T	A	V	N	L	E	P	K	T	V	K	L	L	A	E	E	Y	S	N	I	S	A	V
Template Known Secondary structure																T		S									S	S																			S	S												S																T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	T	I	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S	F	S	V	F	C	G	Y	D	D	H	L	L	N	T	M	L	L	G	G	D	G	A	I	T	A	S	A	N	F	A	P	E	L	S	V	G	I	Y	R	A	W	R	E	G	D	L	A	T	A	A	T	L	N	K	K	L	L
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		K	E	A	N	P	N	L	S	Q	V	S	E	L	I	H	.	.	.	.	.	D	A	K	I	T	V	L	S	G	N	D	E	L	T	L	P	I	I	A	L	G	G	K	G	V	I	S	V	V	A	N	I	V	P	K	E	F	V	E	M	V	N	Y	A	L	E	G	D	F	E	K	A	R	E	I	H	Y	K	L	F
Template Known Secondary structure						S											.	.	.	.	.		T							S	S	G	G	G								T							S	G	G	G	T															T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	P	A	I	Y	A	L	E	T	P	F	V	S	L	I	K	Y	S	M	Q	C	V	G	L	P	V	E	T	Y	C	L	P	P	I	L	E	A	S	E	E	A	K	D	K	V	H	V	L	L	T	A	Q	G	I	L
Query Conservation
Alig confidence									.																			.
Template Conservation									.																			.
Template Sequence		P	L	M	K	A	M	F	.	I	E	T	N	P	I	P	V	K	T	A	L	N	M	M	G	R	P	.	A	G	E	L	R	L	P	L	C	E	M	S	E	E	H	K	K	I	L	E	N	V	L	K	D	L	G	L	I
Template Known Secondary structure							T	T	.	S	S	S	T	T										T	T		S	.						T	T	S																		T	T
Template Predicted Secondary structure									.																			.
Template SS confidence
		236	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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