Job Description P39359 Confidence 72.50% Date Thu Jan 5 11:59:49 GMT 2012 Rank 362 Aligned Residues 173 % Identity 14% Template c2w9mB_ PDB info PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans Resolution 2.46 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.																																				.
Query SS confidence																																					.	.	.																																				.
Query Sequence		S	T	F	H	R	D	G	T	L	D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	.	.	.	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	P	.	S	T	D	E	A	V
Query Conservation																																					.	.	.																																				.
Alig confidence						.						.	.	.																							.	.	.																																				.
Template Conservation						.						.	.	.
Template Sequence		S	T	W	S	.	D	G	G	A	S	.	.	.	I	R	E	M	A	E	A	T	L	T	L	G	H	E	F	L	G	T	A	D	H	S	R	A	A	Y	Y	A	N	G	L	T	I	E	R	L	R	E	Q	L	K	E	I	R	E	L	Q	R	A	G	L	P	I	V	A	G	S	E	V	D	I	L	D	D	G	S	L
Template Known Secondary structure			T	T	T	.	T		S	S		.	.	.											T	T		S								B	T	T		G	G	G	T		B																		T	T											B		T	T	S		B
Template Predicted Secondary structure						.						.	.	.
Template SS confidence
		335	.	.	.		.	340	.	.	.				.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	.	.	.	.	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	E	N	I	V	G	I	K
Query Conservation																																																	.	.	.	.
Alig confidence											.																																						.	.	.	.																													.
Template Conservation											.																																																																						.
Template Sequence		D	F	P	D	D	V	L	G	E	.	L	D	Y	V	V	V	S	V	H	S	N	F	T	L	D	A	A	R	Q	T	E	R	L	I	R	A	V	S	H	P	L	V	T	V	L	G	H	A	T	G	R	L	L	L	R	R	P	G	Y	A	L	D	L	D	A	V	L	G	A	C	E	A	N	G	T	V	V	E	I	.
Template Known Secondary structure		S	S						T	T	.	S	S								S		T	T	S														T		S	S						S	T	T			B	T	T	T	B																		T						.
Template Predicted Secondary structure											.																																																																						.
Template SS confidence
		411	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	I	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S	F	S	V	F	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	N	A	A	R	L	D	L	D	W	R	E	A	L	R	W	R	E	R	L	K	F	A	I	N	T
Template Known Secondary structure				S	T	T	T		B	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions