Job Description P39359 Confidence 74.55% Date Thu Jan 5 11:59:49 GMT 2012 Rank 345 Aligned Residues 120 % Identity 16% Template c2vwtA_ PDB info PDB header:lyase Chain: A: PDB Molecule:yfau, 2-keto-3-deoxy sugar aldolase; PDBTitle: crystal structure of yfau, a metal ion dependent class ii2 aldolase from escherichia coli k12 - mg-pyruvate product3 complex Resolution 1.93 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.																											.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		K	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	.	.	.	.	.	.	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E
Template Known Secondary structure											T	T							S		.	.	.	.	.	.			S												S		T	T	T					S		G	G	G	S	G	G	G	G	G	G	T	S	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.										.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	.	G	A	D	G	I	V	A	I	N	.	.	.	.	.	.	.	.	.	.	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T
Query Conservation																			.										.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.															.										.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																																																.	.	.	.	.	.	.	.
Template Sequence		.	.	.	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	.	.	.	.	.	.	.	.	A	V	A	P	D	M
Template Known Secondary structure		.	.	.	S						T						T	S	T	T															T	T		T	T		T	T	S																	T	T							.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure		.	.	.																																																																.	.	.	.	.	.	.	.
Template SS confidence
					154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	R	L	A	L	Q	N	E	N	I	V	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	Q	C	L	A	W	G	A	N	F	V	A	V
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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