Job Description P39359 Confidence 79.72% Date Thu Jan 5 11:59:49 GMT 2012 Rank 316 Aligned Residues 169 % Identity 9% Template c2ox4E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of putative dehydratase from zymomonas mobilis zm4 Resolution 1.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query Sequence		D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	P	.	S	T	D	E	A
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation
Template Sequence		R	K	E	E	Y	A	E	E	A	L	K	A	V	A	E	G	Y	D	A	V	K	V	D	V	L	A	H	D	R	N	G	S	R	E	G	V	F	L	E	G	P	L	P	S	E	T	I	K	I	G	V	E	R	V	E	A	I	R	N	A	V	G	P	D	V	D	I	I	V	E	N	H	G	H	T	D	L	V	S	A
Template Known Secondary structure		S														T	T		S						S	S	S	S		T	T	S			T	T				S	S	S																						T	T	S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	.	E	N	I	V	G	I	K	D	T
Query Conservation																																																																								.
Alig confidence															.	.	.	.	.	.	.																														.	.	.	.	.	.																.
Template Conservation															.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		I	Q	F	A	K	A	I	E	E	F	N	I	F	.	.	.	.	.	.	.	F	Y	E	E	I	N	T	P	L	N	P	R	L	L	K	E	A	K	K	K	I	D	I	P	L	A	S	G	E	.	.	.	.	.	.	R	I	Y	S	R	W	G	F	L	P	F	L	E	D	R	S	I	D	V	I	Q	P	D	L	G
Template Known Secondary structure									G	G	G			S	.	.	.	.	.	.	.						S		T	T	S	T								T	T			S						T	.	.	.	.	.	.	T													T	T			S						T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.							.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
			167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S	F	S	V	F	C	G	Y	D	D	H	L	L	N	T	M	L	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	C	G	G	F	T	E	F	K	K	I	A	D	M	A	H	I	F	E	V	T	V	Q	A	H	V	A	G	T	G	V	A	E	A	A	S	L	H
Template Known Secondary structure		T	T	T															T	T									S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions