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Job Description | P39359 | Confidence | 48.95% | Date | Thu Jan 5 11:59:49 GMT 2012 |
Rank | 497 | Aligned Residues | 142 |
% Identity | 8% | Template | c2hqbA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcriptional activator of comk gene; |
PDBTitle: crystal structure of a transcriptional activator of comk2 gene from bacillus halodurans
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Resolution | 2.70 Å |
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18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | G | T | L | D | K | K | A | M | R | E | V | A | D | F | L | I | N | K | G | V | D | G | L | F | Y | L | G | T | G | G | E | F | S | Q | M | N | T | A | Q | R | M | A | L | A | E | E | A | V | T | I | V | D | G | R | V | P | V | L | I | G | V | G | S | P | S | T | D | E | A | V | K | L | A | Q | H | A | Q | A | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | G | V | N | S | E | Q | K | A | H | R | R | I | K | E | L | V | D | G | G | V | N | L | I | F | G | H | G | H | A | F | A | E | Y | F | S | T | I | H | N | Q | Y | P | D | V | H | F | V | S | F | N | G | E | V | K | G | E | N | I | T | S | L | H | F | E | G | Y | A | X | G | Y | F | G | G | X | V | A | A | S | X |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
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98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | A | D | G | I | V | A | I | N | P | Y | Y | W | K | V | A | P | R | N | L | D | D | Y | Y | Q | Q | I | A | R | S | V | T | L | P | V | I | L | Y | N | F | P | D | L | T | G | Q | D | L | T | P | E | T | V | T | R | L | A | L | Q | N | E | N | I | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | E | T | H | K | V | G | V | I | A | A | F | P | . |
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W | Q | P | E | V | E | G | F | V | D | G | A | K | Y | X | N | E | S | E | A | F | V | R | Y | V | G | E | W | T | D | A | D | K | A | L | E | L | F | Q | E | L | Q | K | E | Q | V | D | V | F |
Template Known Secondary structure |   |
| S | S | S |  |  |  |  |  |  | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
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. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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