Job Description P39359 Confidence 64.52% Date Thu Jan 5 11:59:49 GMT 2012 Rank 420 Aligned Residues 119 % Identity 19% Template c2gzxB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative tatd related dnase; PDBTitle: crystal structure of the tatd deoxyribonuclease mw0446 from2 staphylococcus aureus. northeast structural genomics consortium3 target zr237. Resolution 2.20 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.														.	.	.	.
Query SS confidence																																																													.	.	.	.														.	.	.	.
Query Sequence		M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	G	S	P	S	T	.	.	.	.	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	.	.	.	.
Query Conservation																																																													.	.	.	.														.	.	.	.
Alig confidence																						.	.	.	.	.	.	.																.	.																.	.	.	.														.	.	.	.
Template Conservation																						.	.	.	.	.	.	.																.	.
Template Sequence		L	S	E	V	I	T	R	A	R	E	A	G	V	D	R	X	F	V	V	G	.	.	.	.	.	.	.	F	N	K	S	T	I	E	R	A	X	K	L	I	D	E	.	.	Y	D	F	L	Y	G	I	I	G	W	H	P	V	D	A	I	D	F	T	E	E	H	L	E	W	I	E	S	L	A	Q	H	P	K	V	I
Template Known Secondary structure												T	T									.	.	.	.	.	.	.		S														.	.		T	T									G	G	G	G	G	G													T	T	S	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.																.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
				98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	E	N
Query Conservation		.	.
Alig confidence		.	.																																								.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		G	I	G	E	X	G	L	D	Y	H	W	D	K	S	P	A	D	V	Q	K	E	V	F	R	K	Q	I	A	L	A	K	R	L	K	L	P	I	I	I	H	N	.	.	.	.	.	.	R	E	A	T	Q	D	C	I	D	I	L	L	E	E	H	A	E
Template Known Secondary structure											S			S	S																				T								.	.	.	.	.	.		S												T	T	G	G
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions