Job Description P39359 Confidence 73.28% Date Thu Jan 5 11:59:49 GMT 2012 Rank 355 Aligned Residues 169 % Identity 14% Template c2gl5A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative dehydratase protein; PDBTitle: crystal structure of putative dehydratase from salmonella thyphimurium Resolution 1.60 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.																		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.
Predicted Secondary structure																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		D	K	K	A	M	R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	.	F	Y	L	G	T	G	G	E	F	S	Q	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	R	V	P	V	L	I	G	V	.	G	S	P
Query Conservation																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence																						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		T	P	E	E	Y	A	E	A	A	R	A	A	L	D	D	G	Y	D	A	I	K	V	D	P	L	E	I	D	R	N	G	D	D	C	V	F	Q	N	R	N	R	N	Y	S	G	L	L	L	A	D	Q	L	K	M	G	E	A	R	I	A	A	M	R	E	A	M	G	D	D	A	D	I	I	V	E	I	H	S	L	L
Template Known Secondary structure		S														T	T		S						S	S	S	B		T	T	S		B	T	T	T	S	S			G	G	G	G	S																							S	S	S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		S	T	D	E	A	V	K	L	A	Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	T	L	P	V	I	L	Y	N	F	P	D	L	T	G	Q	D	L	T	P	E	T	V	T	R	L	A	L	Q	N	.	E	N	I	V
Query Conservation																																																																													.
Alig confidence																														.	.	.	.	.	.	.																		.	.	.	.	.	.																		.
Template Conservation																														.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		G	T	N	S	A	I	Q	F	A	K	A	I	E	K	Y	R	I	F	L	Y	E	E	P	I	H	P	L	N	.	.	.	.	.	.	.	S	D	N	M	Q	K	V	S	R	S	T	T	I	P	I	A	T	.	.	.	.	.	.	G	E	R	S	Y	T	R	W	G	Y	R	E	L	L	E	K	Q	S	I	A	V	A
Template Known Secondary structure														G	G	G								S	S		S	S		.	.	.	.	.	.	.												S	S					.	.	.	.	.	.		T	T			T	T									T	T			S
Template Predicted Secondary structure																														.	.	.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.							.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		162	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		G	I	K	D	T	I	.	D	S	V	G	H	L	R	T	M	I	N	T	V	K	S	V	R	P	S	F	S	V	F	C	G	Y	D	D	H	L	L	N	T	M	L	L
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		Q	P	D	L	C	L	C	G	G	I	T	E	G	K	K	I	C	D	Y	A	N	I	Y	D	T	T	V	Q	V	H	V	C	G	G	P	V	S	T	V	A	A	L	H
Template Known Secondary structure					T	T	T	T	T														T	T	T									S	S
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions