|   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
|
|
|
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | F | L | I | N | K | G | V | D | G | L | F | Y | L | G | T | G | G | E | F | S | Q | M | N | T | A | Q | R | . |
. |
. |
. |
M | A | L | A | E | E | A | V | T | I | V | D | G | R | V | P | V | L | I | G | V | G | S | P | S | T | D | E | A | V | K | L | A | Q | H | A | Q | A | Y | G | A | D | G | I | V | A | I |
Query Conservation |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|   |   |   |
|
|   |
|
|
| . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|
|   |   |
|   |
| . | . | . | . | . | . | . | . | . |
|
|
|   |   |   |
|   |
|   |   |
|   |
|   |   |
|   |   |   |   | . | . |   |
|
|
|
|   |   |
|   |
|   |   |   |   |
| . | . | . | . |
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |
Template Sequence |   |
Y | S | K | F | M | E | R | Y | A | V | G | L | S | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | T | E | E | K | Y | F | N | G | S | Y | E | T | L | R | K | I | A | S | S | V | . |
. |
S | I | P | I | L | M | K | D | F | I | V | K | E | S | Q | . |
. |
. |
. |
I | D | D | A | Y | N | L | G | A | D | T | V | L | L | I |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T |
| S |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | S | S |
|  |  |  |
| S |
|
|
| S |  |  |  | . | . | . | . |  |  |  |  |  |  |  | T |
| S | S | B |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | Y | Y | W | K | V | A | P | R | N | L | D | D | Y | Y | Q | Q | I | A | R | S | V | T | L | P | V | I | L | Y | N | F | P | D | L | T | G | Q | D | L | T | P | E | T | V | T | R | L | A | L | Q | N | E | N | I | V | G | I | . |
. |
K | D | T | I | D | S | V | G | H | L | R | T | M | I | N | T | V | K | S | V |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|
| . | . |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . | . | . |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|   | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
V | K | I | . |
. |
. |
L | T | E | R | E | L | E | S | L | L | E | Y | A | R | S | Y | G | M | E | P | L | I | E | I | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | N | D | L | D | I | A | L | R | I | G | A | R | F | I | G | I | N | S | R | D | L | E | T | L | E | I | N | K | E | N | Q | R | K | L | I | S | M | I |
Template Known Secondary structure |   |
T | T | T | . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S | B |
| T | T | T |
|
| B |
|  |  |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
 |
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
134 | . | . | |
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
  |
  |   |
184 | . | . | . | . | . | 190 | . | . | |
|
|
|
. | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | S | F | S | V | F | C | G | . |
. |
. |
. |
Y | D | D | H | L | L | N | T | M | L | L | G | G | D | G | A | I | T | A | S | A |
Query Conservation |   |
  |   |   |   |   |
|   |   |
| . | . | . | . |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |   |
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|
|
Template Sequence |   |
P | S | N | V | V | K | V | A | E | S | G | I | S | E | R | N | E | I | E | E | L | R | K | L | G | V | N | A | F | L | I | G | S | S |
Template Known Secondary structure |   |
| T | T | S |  |  |  |  |  | S |
|
|
|
|  |  |  |  |  |  |  | T | T | T | T |
|
|  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
202 | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
  |