Return to main results Retrieve Phyre Job Id

Job DescriptionP39359
Confidence95.79%DateThu Jan 5 11:59:49 GMT 2012
Rank107Aligned Residues157
% Identity14%Templatec2c3zA_
PDB info PDB header:lyaseChain: A: PDB Molecule:indole-3-glycerol phosphate synthase; PDBTitle: crystal structure of a truncated variant of indole-3-2 glycerol phosphate synthase from sulfolobus solfataricus
Resolution2.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50........ .60.........70.........80.........90.........100.....
Predicted Secondary structure 











....













Query SS confidence 




























. . . .














































Query Sequence  ADFLINKGVDGLFYLGTGGEFSQMNTAQR. . . . MALAEEAVTIVDGRVPVLIGVGSPSTDEAVKLAQHAQAYGADGIVAI
Query Conservation 
  
   

 

   




   

 


....  
             

 

   

   
  
  
   




   
Alig confidence 













.........





....










..














....














Template Conservation       
 

  
 
.........


   
 
  
 
  
    .. 



  
 
    
....
  
  



 
 
 
Template Sequence  YSKFMERYAVGLSI. . . . . . . . . LTEEKYFNGSYETLRKIASSV. . SIPILMKDFIVKESQ. . . . IDDAYNLGADTVLLI
Template Known Secondary structure  TTT
S.........






..SS

S


S....T
SSB
Template Predicted Secondary structure 



.........








..







....



Template SS confidence 















































































   6970.........80.. .......90.........100... ......110........ .120.........130...
 
   106...110.........120.........130.........140.........150.........160... ......170.........180...
Predicted Secondary structure 
























..






Query SS confidence 

























































. .



















Query Sequence  NPYYWKVAPRNLDDYYQQIARSVTLPVILYNFPDLTGQDLTPETVTRLALQNENIVGI. . KDTIDSVGHLRTMINTVKSV
Query Conservation   
 
   
   
      

 
   





 
  

  
    
  
    
 
 

..
 
                 
Alig confidence 


...
























.........

















..



















Template Conservation     ...
    
  
       

  

 
 .........
  
   
   

  
 
                 
    
Template Sequence  VKI. . . LTERELESLLEYARSYGMEPLIEIN. . . . . . . . . DENDLDIALRIGARFIGINSRDLETLEINKENQRKLISMI
Template Known Secondary structure  TTT...S
TT



.........STT
SSB
TTT

B
SS
Template Predicted Secondary structure 

...







.........















Template SS confidence 















































































   134.. ...140.........150.........160. ........170.........180.........190.........200.
 
   184.....190.. .......200.........210...
Predicted Secondary structure 



....



Query SS confidence 








. . . .




















Query Sequence  RPSFSVFCG. . . . YDDHLLNTMLLGGDGAITASA
Query Conservation       
  
.... 
      
  
  
 

   
Alig confidence 








....




















Template Conservation      


  


   


      




 



Template Sequence  PSNVVKVAESGISERNEIEELRKLGVNAFLIGSS
Template Known Secondary structure 
TTSS



TTTT


Template Predicted Secondary structure 












Template SS confidence 

































   202.......210.........220.........230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions