Job Description P39359 Confidence 92.98% Date Thu Jan 5 11:59:49 GMT 2012 Rank 177 Aligned Residues 108 % Identity 7% Template c1ydoC_ PDB info PDB header:lyase Chain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181. Resolution 2.71 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.										80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																										.	.	.	.	.																						.									.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.																						.									.	.	.	.	.	.	.	.	.
Query Sequence		R	E	V	A	D	F	L	I	N	K	G	V	D	G	L	F	Y	L	G	T	G	G	E	F	.	.	.	.	.	S	Q	M	N	T	A	Q	R	M	A	L	A	E	E	A	V	T	I	V	D	G	.	R	V	P	V	L	I	G	V	.	.	.	.	.	.	.	.	.	G	S	P	S	T	D	E	A	V	K	L	A
Query Conservation																										.	.	.	.	.																						.									.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.																						.									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	G	L	E	N	A	L	E	G	G	I	N	E	A	C	V	F	X	S	A	S	E	T	H	N	R	K	N	I	N	K	S	T	S	E	S	L	H	I	L	K	Q	V	N	N	D	A	Q	K	A	N	L	T	T	R	A	Y	L	S	T	V	F	G	C	P	Y	E	K	D	V	P	I	E	Q	V	I	R	L	S
Template Known Secondary structure												T		S								S	S						T	T	T		S																			T	T										T	T		B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		Q	H	A	Q	A	Y	G	A	D	G	I	V	A	I	N	P	Y	Y	W	K	V	A	P	R	N	L	D	D	Y	Y	Q	Q	I	A	R	S	V	.	T	L	P	V	I	L	Y
Query Conservation																																							.
Alig confidence																			.																				.
Template Conservation																			.
Template Sequence		E	A	L	F	E	F	G	I	S	E	L	S	L	G	D	T	I	.	G	A	A	N	P	A	Q	V	E	T	V	L	E	A	L	L	A	R	F	P	A	N	Q	I	A	L	H
Template Known Secondary structure								T		S							S	S	.																	T	T	S		G	G	G
Template Predicted Secondary structure																			.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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