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Job DescriptionP39359
Confidence89.16%DateThu Jan 5 11:59:49 GMT 2012
Rank235Aligned Residues106
% Identity11%Templatec1vliA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  IPPVSSTFHRDGTLDKKAMREVADFLINKGVDGLFYLGTGGEFSQMNTAQRMALAEEAVTIVDGRVPVLIGVGSPSTDEA
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Template Sequence  VIFLSTVCDEGS. . . . . . . . . . ADLLQSTSPSAFKIA. . SYEINHLPL. . . . . . . . . LKYVARLNRPXIFSTAGAEISDV
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B

S..........TT

S

..GGGTT
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TT

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   103......110.... .....120......... 130........ .140.........150.........160.
 
   88.90.........100.... .....110.........120........ .130....
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Query Sequence  VKLAQHAQAYGADGIVA. . INPYYWKVAPRNLDDYYQQIARSV. TLPVIL
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Template Sequence  HEAWRTIRAEGNNQIAIXHCVAKYPAPPEYSNLSVIPXLAAAFPEAVIGF
Template Known Secondary structure  TTT



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   162.......170.........180.........190.........200.........210.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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