Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB46
Confidence10.42%DateThu Jan 5 11:14:37 GMT 2012
Rank6Aligned Residues100
% Identity16%Templatec3h05A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein vpa0413; PDBTitle: the crystal structure of a putative nicotinate-nucleotide2 adenylyltransferase from vibrio parahaemolyticus
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  MKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVV
Query Conservation 






























   

 






 


 

 


  




 





   
 
   

Alig confidence 








..




































































Template Conservation 



 
  
.. 


 
 

  

  
        
         
                                 
Template Sequence  MKKIAIFGS. . AFNPPSLGHKSVIESLSHFDLVLLEPSIMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQALYSVTTYALL
Template Known Secondary structure 

..

SS

TT
TTSS






TT





Template Predicted Secondary structure 



..































Template SS confidence 















































































   1........ 10.........20.........30.........40.........50.........60.........70........
 
   81........90.........100...
Predicted Secondary structure 



Query SS confidence 






















Query Sequence  EKLNQVCAKDPQMLLITAIDDTM
Query Conservation    

  

 

  



  
  
Alig confidence 







.













Template Conservation          .      
 
 
   
Template Sequence  EKIQEIYP. TADITFVIGPDNFF
Template Known Secondary structure  ST.TS
Template Predicted Secondary structure 

.


Template SS confidence 






















   90....... ..100.........110.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions