Job Description P0AB46 Confidence 2.44% Date Thu Jan 5 11:14:37 GMT 2012 Rank 41 Aligned Residues 34 % Identity 15% Template c2k6xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:rna polymerase sigma factor rpod; PDBTitle: autoregulation of a group 1 bacterial sigma factor involves2 the formation of a region 1.1- induced compacted structure Resolution UNK

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		33	.	.	.	.	.	.	40	.	.	.	.	.						.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		Y	I	T	C	A	E	A	N	E	M	A	K	T	.	.	.	.	.	D	S	A	Q	V	A	E	I	V	A	V	M	G	N	A	S	V	A	S	R	D
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		Y	I	T	Y	E	D	I	D	K	A	F	P	P	D	F	E	G	F	D	T	N	L	I	E	R	I	H	E	E	L	E	K	H	G	I	N	I	V	E
Template Known Secondary structure		S		B									S		S		S	S																T					B
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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