Return to main results Retrieve Phyre Job Id

Job DescriptionP31697
Confidence100.00%DateThu Jan 5 11:48:40 GMT 2012
Rank9Aligned Residues121
% Identity36%Templated2j2za1
SCOP infoImmunoglobulin-like beta-sandwich PapD-like Pilus chaperone
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80 .........90.........100......... 110...
Predicted Secondary structure 

















..












.



Query SS confidence 











































. .




























.



Query Sequence  GVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVK. . DGRFIVTPPLFAMKGKKENTLRILDATNN. QLPQ
Query Conservation 

 
  



           
 
       


 
        ..  



 





 

  
 


      . 

 
Alig confidence 











































..




























.



Template Conservation 

 
  



         
 
 
       


 

            






 

 
     


        

 
Template Sequence  AVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITGPVIATPPVQRLEPGAKSMVRLSTTPDISKLPQ
Template Known Secondary structure 
S
STTSS

SSS

TTS
SSSS
S
TT

GGGGGS
S
Template Predicted Secondary structure 






































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   114.....120.........130.........140.........150.........160
Predicted Secondary structure 



















Query SS confidence 














































Query Sequence  DRESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPP
Query Conservation 



 
 
 
 


           
 



  






  
    
Alig confidence 

















...

























Template Conservation 



   
 
  

    ...    
 
  
  






  
   
Template Sequence  DRESLFYFNLREIPPRSE. . . KANVLQIALQTKIKLFYRPAAIKTRP
Template Known Secondary structure  SS





...
SS






GGG



Template Predicted Secondary structure 






...










Template SS confidence 














































   81........90........ .100.........110.........120....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions