Job Description P31697 Confidence 4.72% Date Thu Jan 5 11:48:40 GMT 2012 Rank 92 Aligned Residues 78 % Identity 18% Template c2z59A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:protein adrm1; PDBTitle: complex structures of mouse rpn13 (22-130aa) and ubiquitin Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure				.																																																					.	.	.
Query SS confidence				.																																																					.	.	.
Query Sequence		A	G	.	V	A	L	G	A	T	R	V	I	Y	P	A	G	Q	K	Q	E	Q	L	A	V	T	N	N	D	E	N	S	T	Y	L	I	Q	S	W	V	E	N	A	D	G	V	K	D	G	R	F	I	V	T	P	P	.	.	.	L	F	A	M	K	G	K	K	E	N	T	L	R	I	L	D	A	T	N	N	Q	L
Query Conservation				.																																																					.	.	.
Alig confidence				.								.	.																			.	.																								.	.	.																				.	.	.
Template Conservation												.	.																			.	.																																														.	.	.
Template Sequence		A	G	K	M	S	L	K	G	T	T	.	.	V	T	P	D	K	R	K	G	L	V	Y	I	Q	Q	T	D	D	S	.	.	L	I	H	F	C	W	K	D	R	T	S	G	T	V	E	D	D	L	I	I	F	P	D	D	C	E	F	K	R	V	P	Q	C	P	S	G	R	V	Y	V	L	K	F	K	A	.	.	.
Template Known Secondary structure									T	T		.	.						S										T	T	S	.	.									T	T	T											T	T	T							S	S		S	S									S	S	.	.	.
Template Predicted Secondary structure												.	.																			.	.																																														.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		112	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	D	R	E	S	L	F	W	M
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	S	K	R	L	F	F	W	M
Template Known Secondary structure		.	T	T
Template Predicted Secondary structure		.
Template SS confidence
			101	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions