Job Description P31697 Confidence 5.62% Date Thu Jan 5 11:48:40 GMT 2012 Rank 87 Aligned Residues 81 % Identity 21% Template c2z4dA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn13; PDBTitle: nmr structures of yeast proteasome component rpn13 Resolution UNK

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		36	.		.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure				.						.																																								.	.	.	.								.	.	.
Query SS confidence				.						.																																								.	.	.	.								.	.	.
Query Sequence		A	G	.	V	A	L	G	A	.	T	R	V	I	Y	P	A	G	Q	K	Q	E	Q	L	A	V	T	N	N	D	E	N	S	T	Y	L	I	Q	S	W	V	E	N	A	D	G	V	K	D	.	.	.	.	G	R	F	I	V	T	P	.	.	.	P	L	F	A	M	K	G	K	K	E	N	T	L	R	I	L	D	A
Query Conservation				.						.																																								.	.	.	.								.	.	.
Alig confidence				.						.																																								.	.	.	.								.	.	.																		.
Template Conservation																																																																																	.
Template Sequence		A	G	V	C	E	Y	N	E	D	S	R	L	C	T	P	I	P	V	Q	G	E	I	E	I	K	P	N	E	E	E	E	L	G	F	W	D	F	E	W	R	P	T	E	K	P	V	G	R	E	L	D	P	I	S	L	I	L	I	P	G	E	T	M	W	V	P	I	K	S	S	K	S	G	R	I	F	A	L	V	.
Template Known Secondary structure									T	T	T	T						S				B						T	T	T	S	S	S								B	S		S			S	S												T	T	T	S				S			S	S	S									.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	N	Q	L	P	Q	D	R	E	S	L	F	W	M
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	F	S	S	N	E	R	Y	F	F	W	L
Template Known Secondary structure		.	.	.	.		S	S	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						91	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions