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Job DescriptionP31697
Confidence100.00%DateThu Jan 5 11:48:40 GMT 2012
Rank3Aligned Residues196
% Identity35%Templatec2co7B_
PDB info PDB header:fibril proteinChain: B: PDB Molecule:putative fimbriae assembly chaperone; PDBTitle: salmonella enterica safa pilin in complex with the safb2 chaperone (type ii)
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  GRAEAGVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPPLFAMKGKKENTLRILDATNNQL
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Template Sequence  ATKLFSVKLGATRVIYHAGTAGATLSVSNPQNY. PILVQSSVKAADKSSPAPFLVMPPLFRLEANQQSQLRIVR. TGGDM
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   8.10.........20.........30.........40 .........50.........60.........70.........80 .....
 
   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  PQDRESLFWMNVKAIPSMDKSKLTENTLQLAIISRIKLYYRPAKLALPPDQAAEKLRFRRSANSLTLINPTPYYLTVTEL
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Template Sequence  PTDRETLQWVCIKAVPPETLD. . . . . . LNLSINACDKLIFRPDAVKGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASV
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   86...90.........100...... ...110.........120.........130.........140.........150.........
 
   192...... .200.........210.........220.........230.........240
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Query Sequence  NAGTRVL. ENALVPPMGESTVKLPSDAGSNITYRTINDYGALTPKMTGVM
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Template Sequence  TVGGKPITGLEYVPPFADKTL. . . . . NHGDIEWRVITDFGGESHPFHYVL
Template Known Secondary structure  TT





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   171........180.........190. ........200.........210.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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