Job Description P31697 Confidence 15.66% Date Thu Jan 5 11:48:40 GMT 2012 Rank 61 Aligned Residues 111 % Identity 10% Template c1pzdA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:coatomer gamma subunit; PDBTitle: structural identification of a conserved appendage domain2 in the carboxyl-terminus of the copi gamma-subunit. Resolution 2.31 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		L	A	V	T	N	N	D	E	N	S	T	Y	L	I	Q	S	W	V	E	N	A	D	G	V	K	D	G	R	F	I	V	T	P	P	L	F	A	M	K	G	K	K	E	N	T	L	R	I	L	D	.	.	.	.	A	T	N	N	Q	L	P	Q	D	R	E	S	L	F	W	M	N	V	K	A	I	P	S	M	D	K
Query Conservation																																																				.	.	.	.
Alig confidence											.															.																										.	.	.	.
Template Conservation											.															.
Template Sequence		F	D	C	T	N	T	L	N	D	.	Q	T	L	E	N	V	T	V	Q	M	E	P	S	E	.	A	Y	E	V	L	C	Y	V	P	A	R	S	L	P	Y	N	Q	P	G	T	C	Y	T	L	V	A	L	P	K	E	D	P	T	A	V	A	C	T	F	S	C	V	M	K	F	T	V	K	D	C	D	P	T	T	G
Template Known Secondary structure									T	T	.													S	S	.	S														B	T													S	S		T	T																	B		T	T	T
Template Predicted Secondary structure											.															.
Template SS confidence
		663	.	.	.	.	.	.	670	.		.	.	.	.	.	.	.	.	680	.	.	.	.	.		.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		S	K	L	T	E	N	T	L	Q	L	A	I	I	S	R	I	K	L	.	.	.	.	Y	Y	R	P	A	K	L	A	L	P	P	D	Q	A	A	E	K	L	R	F
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.										.
Template Conservation																																	.
Template Sequence		E	A	D	D	E	G	Y	E	D	E	Y	V	L	E	D	L	E	V	T	I	A	D	H	I	Q	K	V	M	K	L	N	.	F	E	A	A	W	D	E	V	G	D
Template Known Secondary structure			B		S																G	G	G	G							S		.										S
Template Predicted Secondary structure																																	.
Template SS confidence
		741	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.		.	.	.	.	.	.	.	.	780	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions