Job Description P37643 Confidence 39.09% Date Thu Jan 5 11:56:15 GMT 2012 Rank 6 Aligned Residues 224 % Identity 14% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	E	Y	T	P	I	N	S	R	N	K	V	L	V	A	S	L	I	G	T	A	I	E	F	F	D	F	Y	I	Y	A	T	A	A	V	I	V	F	P	H	I	F	F	P	Q	G	D	P	T	A	A	T	L	Q	S	L	A	T	F	A	I	A	F	V	A	R	P	I	G	S	A	V	F	G	H	F	G	D	R
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		A	Q	R	A	Q	P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	.	.	.	.	.	.	.	.	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	.	.	.	.	L	A	T	Y	F	L	S	A	L	F	H	K
Template Known Secondary structure					T	S																													T	.	.	.	.	.	.	.	.	T	S		G	G	G																	.	.	.	.											T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.									.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	R	K	A	T	L	V	A	S	L	L	T	M	G	I	S	T	V	V	I	G	L	L	P	G	Y	A	T	I	G	I	F	A	P	L	L	L	A	L	A	R	F	G	Q	G	L	G	L	G	G	E	W	G	G	A	A	L	L	A	T	E	N	A	P	P	R	K	R	A	L	Y	G	S	F	P	Q	L	G	A
Query Conservation
Alig confidence		.	.																												.	.	.	.	.
Template Conservation		.	.																												.	.	.	.	.
Template Sequence		.	.	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	.	.	.	.	.	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G
Template Known Secondary structure		.	.	T											T	T							T	T	T	T	T	T	S		.	.	.	.	.																					T									S					T	T						T	T
Template Predicted Secondary structure		.	.																												.	.	.	.	.
Template SS confidence
				256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	G	F	F	F	A	N	G	T	F	L	L	L	S	W	L	L	T	D	E	Q	F	M	S	W	G	W	R	V	P	F	I	F	S	A	V	L	V	I	I	G	L	Y	V	R	V	S	L	H	E	S	P	V	F	E	K	V	A	K	A	K	K	Q	V	K	I	P	L	G	T	L	L	T	K	H	V	R	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E	H	K	A	E	R	L	V	L	E	A	K	T	E	I	Q
Template Known Secondary structure												S	T	T																													T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		251	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		409	410	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions