Job Description P0ABL5 Confidence 97.77% Date Thu Jan 5 11:15:47 GMT 2012 Rank 14 Aligned Residues 132 % Identity 15% Template c2j7aE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:cytochrome c nitrite reductase nrfa; PDBTitle: crystal structure of cytochrome c nitrite reductase nrfha2 complex from desulfovibrio vulgaris Resolution 2.3 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80											.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.															100	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	T	E	E	F	C	I	S	C	H	E	M	R	N	T	V	Y	Q	E	Y	M	D	S	V	H	Y	N	N	R	.	.	.	.	.	.	.	.	.	.	S	G	V	R	A	T	C	P	D	C	H	V	P	H	E	F	V	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	I	R	K	L	K	A	S
Query Conservation																															.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	P	A	T	C	W	N	C	K	T	P	K	M	M	E	W	V	K	E	S	G	D	G	F	W	A	K	D	V	N	E	F	R	D	K	I	D	M	K	D	H	T	I	G	C	A	T	C	H	D	P	Q	T	M	E	L	R	I	T	S	V	P	L	T	D	Y	L	V	S	Q	G	K	D	P	K	K	L	P	R
Template Known Secondary structure		S	S	B	G	G	G	G	T	T	T		T	T									G	G	G	S	T	T	S	B	G	G	G	G	T	T	S			T	T	T	T	S	S	T	G	G	G	T	B		T	T	T			B														T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		108	.	110	.	.	.	.	.	.	.	.	.																	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.															.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.															.	.
Query Sequence		K	E	L	Y	G	K	I	F	G	V	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	Q	K	F	E	A	H	R	L	T	M	A	Q	N	E	W	R	R	.	.	.	.	.	M	K	D	N	N	S	Q	E	C	R	N	C	H	N	.	.	F	E	Y	M	D	T	T	A	Q	K	S	V
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.															.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.															.	.
Template Conservation
Template Sequence		N	E	M	R	A	L	V	C	G	Q	C	H	V	E	Y	Y	F	N	G	P	T	M	G	V	N	K	K	P	V	F	P	W	A	E	G	F	D	P	A	D	M	Y	R	Y	Y	D	K	H	G	D	L	Q	V	K	G	F	E	G	K	F	A	D	W	T	H	P	A	S	K	T	P	M	I	K	A	Q	H	P	E	Y
Template Known Secondary structure								T	G	G	G	T	S	S							T	T	S	S	S	T	T							T	T		S	S											S					S	T	T		T	T				S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	M	H	D	Q	A	V	K	D	G	Q	T	C	I	D	C	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	W	I	N	G	T	H	G	A	A	G	V	T	C	A	D	C	H
Template Known Secondary structure					T	T	S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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