Job Description P25553 Confidence 100.00% Date Thu Jan 5 11:42:11 GMT 2012 Rank 43 Aligned Residues 393 % Identity 21% Template c3my7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alcohol dehydrogenase/acetaldehyde dehydrogenase; PDBTitle: the crystal structure of the acdh domain of an alcohol dehydrogenase2 from vibrio parahaemolyticus to 2.25a Resolution 2.30 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	G	Q	A	E	D	A	R	K	A	I	D	A	A	E	R	A	Q	P	E	W	E	A	L	P	A	I	E	R	A	S	W	L	R	K	I	S	A	G	I	R	E	R	A	S	E	I	S	A	L	I	V	E	E	G	G	K	I	Q	Q	L	A	E	V	E	V	A	F	T	A	D	Y	I	D	Y	M	A	E	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	T	N	X	A	E	L	D	A	X	I	A	R	V	K	K	A	Q	E	E	F	A	T	Y	S	Q	E	Q	V	D	K	I	F	R	A	A	S	L	A	A	N	Q	A	R	I	P	L	A	Q	Q	A	V	E	E	S	G	X	G	I	V	E	D	K	V	I	K	N	H	F	A	S	E	F	I	Y	N	K	Y	K
Template Known Secondary structure				S	S																			T	T																				T															S																					T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.
Query SS confidence																																																																.	.	.	.
Query Sequence		A	R	R	Y	E	G	E	I	I	Q	S	D	R	P	G	E	N	I	L	L	F	K	R	A	L	G	V	T	T	G	I	L	P	W	N	F	P	F	F	L	I	A	R	K	M	A	P	A	L	L	T	G	N	T	I	V	I	K	P	S	E	F	.	.	.	.	T	P	N	N	A	I	A	F	A	K	I	V	D	E
Query Conservation																																																																.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.
Template Sequence		D	E	Q	T	C	.	.	.	.	.	.	.	.	.	G	I	L	T	X	T	I	A	E	P	V	G	I	I	C	G	I	V	P	T	T	N	P	T	S	T	A	I	F	K	S	L	I	S	L	K	T	R	N	G	I	I	F	S	P	H	P	R	A	K	N	S	T	N	D	A	A	K	L	V	L	D	A	A	V	A
Template Known Secondary structure		T				S	.	.	.	.	.	.	.	.	.																				T	T	S	T	T													T	T									G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	L	P	R	G	V	F	N	L	V	L	G	R	G	E	T	V	G	Q	E	L	A	G	N	P	K	V	A	M	V	S	M	T	G	S	V	S	A	G	E	K	I	M	A	T	A	A	K	N	I	T	K	V	C	L	E	L	G	G	K	A	P	A	I	V	M	D	D	A	D	L	E	L	A	V	K	A	I	V
Query Conservation
Alig confidence																																																					.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		A	G	A	P	K	D	I	I	G	W	I	D	Q	P	S	V	E	L	S	N	A	L	X	K	H	D	D	I	A	L	I	L	A	T	G	G	P	G	X	V	K	A	A	Y	S	S	G	K	P	A	I	.	.	.	.	.	.	G	V	G	N	V	P	V	V	I	D	E	T	A	D	I	K	R	A	V	A	S	V	L
Template Known Secondary structure		T	T			T	T	S					S	S													T	T								S										T	S	S	S				.	.	.	.	.	.											T	T	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	R	V	I	N	S	G	Q	V	C	N	C	A	E	R	V	Y	V	Q	K	G	I	Y	D	Q	F	V	N	R	L	G	E	A	M	Q	A	V	Q	F	G	N	P	A	E	R	N	D	I	A	M	G	P	L	I	N	A	A	A	L	E	R	V	E	Q	K	V	A	R	A	V	E	E	G	A	R	V	A	F	G
Query Conservation
Alig confidence																																																.	.																												.	.	.	.	.
Template Conservation																																																.	.																												.	.	.	.	.
Template Sequence		X	S	K	T	F	D	N	G	V	V	C	A	S	E	Q	A	V	I	V	V	D	E	V	Y	D	E	V	K	E	R	F	A	S	H	K	A	H	V	L	S	K	T	D	A	D	K	.	.	V	R	K	V	L	L	I	D	G	A	L	N	A	K	I	V	G	Q	P	A	T	A	I	A	E	X	A	.	.	.	.	.
Template Known Secondary structure			G	G	G	G	G	G	G			T	T									G	G	G										T	T	T												.	.								T	T				G	G	G	T	T											.	.	.	.	.
Template Predicted Secondary structure																																																.	.																												.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.					.	.	.	410	.	.	.	.	.	.	.	.	.				420	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.														.	.	.
Query SS confidence																																																						.	.	.	.														.	.	.
Query Sequence		G	K	A	V	E	G	K	G	Y	Y	Y	P	P	T	L	L	L	D	V	R	Q	E	M	S	I	M	H	E	E	T	F	G	P	V	L	P	V	V	A	F	D	T	L	E	D	A	I	S	M	A	N	D	.	.	.	.	S	D	Y	G	L	T	S	S	I	Y	T	Q	N	.	.	.	L	N	V	A	M	K	A	I
Query Conservation																																																						.	.	.	.														.	.	.
Alig confidence																								.																														.	.	.	.														.	.	.
Template Conservation																								.
Template Sequence		G	V	K	V	P	A	D	T	K	V	L	I	G	E	G	L	G	K	V	S	Y	D	.	D	A	F	A	H	E	K	L	S	P	T	L	G	X	F	R	A	D	N	F	E	D	A	V	A	Q	A	V	T	X	V	E	I	G	G	I	G	H	T	S	G	L	Y	T	N	Q	D	V	N	A	D	R	I	R	Y	F	G
Template Known Secondary structure		T					T	T									S	S	S			T	T	.		G	G	G	S			S	S	S								S	S																S	S								S		T	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.			.	450	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		K	G	L	K	F	G	E	T	Y	I	N	R	E	N	F	E	A	M	Q	G	F	.	.	H	A	G	W	R	K
Query Conservation																							.	.
Alig confidence																							.	.
Template Conservation
Template Sequence		D	K	X	K	T	A	R	I	L	I	N	I	P	T	T	S	E	N	V	G	P	K	H	L	I	N	K	K	T
Template Known Secondary structure							S					S										G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.