Job Description P25553 Confidence 100.00% Date Thu Jan 5 11:42:11 GMT 2012 Rank 41 Aligned Residues 413 % Identity 18% Template c3k9dD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of probable aldehyde dehydrogenase from listeria2 monocytogenes egd-e Resolution 2.00 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	D	A	R	K	A	I	D	A	A	E	R	A	Q	P	E	W	E	A	L	P	A	I	E	R	A	S	W	L	R	K	I	S	A	G	I	R	E	R	A	S	E	I	S	A	L	I	V	E	E	G	G	K	I	Q	Q	L	A	E	V	E	V	A	F	T	A	D	Y	I	D	Y	M	A	E	W	A	R	R
Query Conservation
Alig confidence																																																																					.	.
Template Conservation																																																																					.	.
Template Sequence		S	I	Q	E	V	R	N	L	I	E	S	A	N	K	A	Q	K	E	L	A	A	M	S	Q	Q	Q	I	D	T	I	V	K	A	I	A	D	A	G	Y	G	A	R	E	K	L	A	K	M	A	H	E	E	T	G	F	G	I	W	Q	D	K	V	I	K	N	V	F	.	.	A	S	K	H	V	Y	N	Y	I	K	D
Template Known Secondary structure																					S	S																				T															S												.	.										T	T
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.					.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		Y	E	G	E	I	I	Q	S	D	R	P	G	E	N	I	L	L	F	K	R	A	L	G	V	T	T	G	I	L	P	W	N	F	P	F	F	L	I	A	R	K	M	A	P	A	L	L	T	G	N	T	I	V	I	K	P	S	E	F	T	P	N	N	A	I	A	F	A	K	I	.	.	.	.	V	D	E	I	G	L
Query Conservation																																																																								.	.	.	.
Alig confidence																																																																								.	.	.	.
Template Conservation
Template Sequence		M	K	T	I	G	M	L	K	E	D	N	E	K	K	V	M	E	V	A	V	P	L	G	V	V	A	G	L	I	P	S	T	N	P	T	S	T	V	I	Y	K	T	L	I	S	I	K	A	G	N	S	I	V	F	S	P	H	P	N	A	L	K	A	I	L	E	T	V	R	I	I	S	E	A	A	E	K	A	G	C
Template Known Secondary structure					S							T	T	T	T																	S	S	S															T	T									G	G	G																			T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	G	V	F	N	L	V	L	G	R	G	E	T	V	G	Q	E	L	A	G	N	P	K	V	A	M	V	S	M	T	G	S	V	S	A	G	E	K	I	M	A	T	A	A	K	N	I	T	K	V	C	L	E	L	G	G	K	A	P	A	I	V	M	D	D	A	D	L	E	L	A	V	K	A	I	V	D	S	R
Query Conservation
Alig confidence																																								.	.	.	.
Template Conservation																																								.	.	.	.
Template Sequence		P	K	G	A	I	S	C	M	T	V	P	T	I	Q	G	T	D	Q	L	M	K	H	K	D	T	A	V	I	L	A	T	G	G	S	A	M	V	K	.	.	.	.	A	A	Y	S	S	G	T	P	A	I	G	V	G	P	G	N	G	P	A	F	I	E	R	S	A	N	I	P	R	A	V	K	H	I	L	D	S	K
Template Known Secondary structure			T	T	S					S	S													T	T								S							.	.	.	.				T	S	S	S					B											T	T	S
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.								320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		V	I	N	S	G	Q	V	C	N	C	A	E	R	V	Y	V	Q	K	G	I	Y	D	Q	F	V	N	R	L	G	E	A	M	Q	A	V	Q	F	G	N	P	A	E	.	.	.	.	.	.	.	R	N	D	I	A	M	G	P	L	I	N	A	A	A	L	E	R	V	E	Q	K	V	A	R	A	V	E	E	G	A	R
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		T	F	D	N	G	T	I	C	A	S	E	Q	S	V	V	V	E	R	V	N	K	E	A	V	I	A	E	F	R	K	Q	G	A	H	F	L	S	D	A	E	A	V	Q	L	G	K	F	I	L	R	P	N	G	S	M	N	P	A	I	V	G	K	S	V	Q	H	I	A	N	L	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	G	G	G	G	T	S	T	T	S								T	T	T											T	T																	B		T	T	S		B		T	T	T	T	T											.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.					410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		V	A	F	G	G	K	A	V	E	G	K	G	Y	Y	Y	P	P	T	L	L	L	D	V	R	Q	E	M	S	I	M	H	E	E	T	F	G	P	V	L	P	V	V	A	F	D	T	L	E	D	A	I	S	M	A	N	D	S	D	Y	.	.	.	.	G	L	T	S	S	I	Y	T	Q	N	L	N	V	A	M	K	A
Query Conservation																																																													.	.	.	.
Alig confidence		.	.	.																				.	.	.																																			.	.	.	.
Template Conservation		.	.	.																				.	.	.
Template Sequence		.	.	.	G	L	T	V	P	A	D	A	R	V	L	I	A	E	E	T	K	V	G	.	.	.	A	K	I	P	Y	S	R	E	K	L	A	P	I	L	A	F	Y	T	A	E	T	W	Q	E	A	C	E	L	S	M	D	I	L	Y	H	E	G	A	G	H	T	L	I	I	H	S	E	D	K	E	I	I	R	E	F
Template Known Secondary structure		.	.	.	T					T	T												S	.	.	.	S	S		T	T	T	S				S	S								S	S													T	T	T	T	T	T	S							S
Template Predicted Secondary structure		.	.	.																				.	.	.
Template SS confidence
					315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.				.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.	.	.	.			.	.	.	.	460	.	.	.						.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																				.												.	.									.	.	.	.	.
Query SS confidence																				.												.	.									.	.	.	.	.
Query Sequence		I	K	G	L	K	F	G	E	T	Y	I	N	R	E	N	F	E	A	.	M	Q	G	F	H	A	G	W	R	K	S	.	.	G	I	G	G	A	D	G	K	.	.	.	.	.	H	G	L	H	E	Y	L	Q	T	Q	V	V
Query Conservation																				.												.	.									.	.	.	.	.
Alig confidence																				.												.	.									.	.	.	.	.
Template Conservation
Template Sequence		A	L	K	K	P	V	S	R	L	L	V	N	T	P	G	A	L	G	G	I	G	A	T	T	N	L	V	P	A	L	T	L	G	C	G	A	V	G	G	S	S	S	S	D	N	I	G	P	E	N	L	F	N	I	R	R	I
Template Known Secondary structure						S		S					S	S							T	T	S	S	S	S	S				S		B	B		T	G	G	G	T		S			S	B			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.