Job Description P25553 Confidence 13.64% Date Thu Jan 5 11:42:11 GMT 2012 Rank 90 Aligned Residues 125 % Identity 19% Template c3ereD_ PDB info PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator Resolution 2.50 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		R	A	S	W	L	R	K	I	S	A	G	I	R	E	R	A	.	.	.	.	S	E	I	S	A	L	I	V	E	E	G	G	K	I	Q	Q	L	A	E	V	E	V	A	F	T	A	D	Y	I	D	Y	M	A	E	W	A	R	R	Y	E	G	E	I	I	Q	S	D	R	P	G	E	N	I	L	L	F	K	R	A	L
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.											.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	G	R	Q	A	R	I	V	A	I	L	S	S	A	Q	V	R	S	Q	N	E	L	A	A	L	L	A	A	E	.	G	I	E	V	T	Q	A	T	L	S	R	D	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	L	G	A	V	K	L	R	G	A	D	G	G	T	G	I	Y	V	V	P	E	D	G
Template Known Secondary structure															T					S											T	.	T												.	.	.	.	.	.	.	.	.	.	.	.			T	T	T							T	T	S	S										S
Template Predicted Secondary structure																																.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.													60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		G	V	T	T	G	I	L	P	W	N	F	P	F	F	L	I	A	R	K	M	A	P	A	L	.	L	T	G	N	T	I	V	I	K	P	S	E	F	T	P	N	N	A	I	A	F	A	K	I	V	D	E	I	G	L	P	R	G	V	F	N	L	V	L	G	R	G
Query Conservation																										.
Alig confidence																										.																	.	.	.													.
Template Conservation																																											.	.	.													.
Template Sequence		S	P	V	R	G	V	S	G	G	T	D	R	M	A	R	L	L	G	E	L	L	V	S	T	D	D	S	G	N	L	A	V	L	R	T	P	P	G	A	A	H	.	.	.	Y	L	A	S	A	I	D	R	A	A	L	P	.	Q	V	V	G	T	I	A	G	D	D
Template Known Secondary structure							T	T	T	T																			T	T							S	T	T	T			.	.	.									T	T		T	.	T								S	S
Template Predicted Secondary structure																																											.	.	.													.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions