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Job DescriptionP25553
Confidence100.00%DateThu Jan 5 11:42:11 GMT 2012
Rank35Aligned Residues471
% Identity23%Templatec2vroB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from2 burkholderia xenovorans lb400
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  VPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRER
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Template Sequence  MTELLKNHVAGQWIAG. TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAK
Template Known Secondary structure 



TT

.SSS

TTT



TT

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T
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   1........10...... ...20.........30.........40.........50.........60.........70.........
 
   83......90.........100.........110.........120... ......130.........140.........150...
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Query Sequence  ASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYE. . . . . . . . . GEIIQSDRPGENILLFKRALGVTTGILPWN
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Template Sequence  RGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN
Template Known Secondary structure 


TT
S
S
STTS

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TT
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   154.....160.........170.........180.........190 .........200.........210.........220.........230..
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Query Sequence  FPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK. IVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVS
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Template Sequence  FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG. . . LLDQIRSFDVVSFTGSAD
Template Known Secondary structure 
TTTT



GGGT
S
TTS

S

TT...TGGG

TT
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   160.........170.........180.........190.........200.........210........ .220.........230......
 
   233......240.. .......250.........260..... ....270.........280.........290.........300.....
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Query Sequence  AGEKIMATAA. . KNITKVCLELGGKAPAIVMDDAD. . . . . LELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL
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Template Sequence  TAATLRAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL
Template Known Secondary structure  TSTT






TT

TTSGGGG

TT
GGG
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   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   306...310.........320.........330.........340.........350....... ..360.........370 ........
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Query Sequence  GEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKA. . . . . VEGKGYYYPPTLL. . LDVRQEMS
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Template Sequence  KAKLAKITVGNPRNDA. VRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL
Template Known Secondary structure  TT

BB
TTSTT.
SB


S
TTS
TTS

BSS
TTTS





S
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   317..320.........330.. .......340.........350.........360.........370.........380.........390.....
 
   379380.........390..... ....400.........410.........420.........430.........440...
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Query Sequence  IMHEETFGPVLPVVAFD. . . . TLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE. . . . . . . . . . .
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Template Sequence  LHDVEVFGPVASVAPYRVTALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV
Template Known Secondary structure  TTT



SS




TTTTSS
S
TTT
GGGTTT


SS

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   396...400.........410.........420.........430.........440.........450.........460.........470.....
 
   444.....450.........460.. .......470........
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Query Sequence  AMQGFHAGWRKSGIGGADG. KHGLHEYLQTQVVYLQ
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Template Sequence  MPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA
Template Known Secondary structure 
TTS

SGGG
S

SGGGGGGGG
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   480.........490.........500.........510.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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