Job Description P25553 Confidence 100.00% Date Thu Jan 5 11:42:11 GMT 2012 Rank 17 Aligned Residues 471 % Identity 35% Template c2ve5H_ PDB info PDB header:oxidoreductase Chain: H: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystallographic structure of betaine aldehyde2 dehydrogenase from pseudomonas aeruginosa Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	P	M	Y	I	D	G	Q	F	V	T	W	R	G	D	A	W	I	D	V	V	N	P	A	T	E	A	V	I	S	R	I	P	D	G	Q	A	E	D	A	R	K	A	I	D	A	A	E	R	A	Q	P	E	W	E	A	L	P	A	I	E	R	A	S	W	L	R	K	I	S	A	G	I	R	E	R	A	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	K	L	Y	I	G	G	R	Y	V	E	A	S	S	G	A	T	F	E	T	I	N	P	A	N	G	E	V	L	A	K	V	Q	R	A	S	R	E	D	V	E	R	A	V	Q	S	A	V	E	G	Q	K	V	W	A	A	M	T	A	M	Q	R	S	R	I	L	R	R	A	V	D	I	L	R	E	R	N	D	E
Template Known Secondary structure			B					S	S	S					S	S									T	T	S																															T	S																			T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		I	S	A	L	I	V	E	E	G	G	K	I	Q	Q	L	A	E	V	.	E	V	A	F	T	A	D	Y	I	D	Y	M	A	E	W	A	R	R	Y	E	G	E	I	I	Q	S	D	R	P	G	E	N	I	L	L	F	K	R	A	L	G	V	T	T	G	I	L	P	W	N	F	P	F	F	L	I	A	R	K	M	A
Query Conservation																				.
Alig confidence																				.																											.
Template Conservation																																															.
Template Sequence		L	A	A	L	E	T	L	D	T	G	K	P	L	A	E	T	R	S	V	D	I	V	T	G	A	D	V	L	E	Y	Y	A	G	L	V	P	A	I	E	G	E	Q	I	P	L	.	R	E	T	S	F	V	Y	T	R	R	E	P	L	G	V	V	A	G	I	G	A	W	N	Y	P	V	Q	I	A	L	W	K	S	A
Template Known Secondary structure																		T	T	T														T	T	G	G	G									.		T	T											S								S	S	S
Template Predicted Secondary structure																																															.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		P	A	L	L	T	G	N	T	I	V	I	K	P	S	E	F	T	P	N	N	A	I	A	F	A	K	I	V	D	E	I	G	L	P	R	G	V	F	N	L	V	L	G	R	G	E	T	V	G	Q	E	L	A	G	N	P	K	V	A	M	V	S	M	T	G	S	V	S	A	G	E	K	I	.	M	A	T	A	A	K
Query Conservation																																																																											.
Alig confidence																																																																											.
Template Conservation
Template Sequence		P	A	L	A	A	G	N	A	M	I	F	K	P	S	E	V	T	P	L	T	A	L	K	L	A	E	I	Y	T	E	A	G	V	P	D	G	V	F	N	V	L	T	G	S	G	R	E	V	G	Q	W	L	T	E	H	P	L	I	E	K	I	S	F	T	G	G	T	S	T	G	K	K	V	M	A	S	A	S	S	S
Template Known Secondary structure						T	T									S	S															T	T			T	T	T						S		T	T	T									T	T								S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	T	K	V	C	L	E	L	G	G	K	A	P	A	I	V	M	D	D	A	D	L	E	L	A	V	K	A	I	V	D	S	R	V	I	N	S	G	Q	V	C	N	C	A	E	R	V	Y	V	Q	K	G	I	Y	D	Q	F	V	N	R	L	G	E	A	M	Q	A	V	Q	F	G	N	P	A	E	R	N	D	I
Query Conservation
Alig confidence																																																																																.
Template Conservation																																																																																.
Template Sequence		S	L	K	E	V	T	M	E	L	G	G	K	S	P	L	I	I	F	P	D	A	D	L	D	R	A	A	D	I	A	V	M	A	N	F	F	S	S	G	Q	V	C	T	N	G	T	R	V	F	I	H	R	S	Q	Q	A	R	F	E	A	K	V	L	E	R	V	Q	R	I	R	L	G	D	P	Q	D	E	N	.	T
Template Known Secondary structure																				T	T	S															G	G	G	G			T	T									G	G	G													T	T			B			T	T	S	T	T	.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360					.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		A	M	G	P	L	I	N	A	A	A	L	E	R	V	E	Q	K	V	A	R	A	V	E	E	G	A	R	V	A	F	G	G	K	A	V	E	G	.	.	.	.	K	G	Y	Y	Y	P	P	T	L	L	L	D	V	R	Q	E	M	S	I	M	H	E	E	T	F	G	P	V	L	P	V	V	A	F	D	T	L	E	D
Query Conservation																																							.	.	.	.
Alig confidence																																							.	.	.	.
Template Conservation
Template Sequence		N	F	G	P	L	V	S	F	P	H	M	E	S	V	L	G	Y	I	E	S	G	K	A	Q	K	A	R	L	L	C	G	G	E	R	V	T	D	G	A	F	G	K	G	A	Y	V	A	P	T	V	F	T	D	C	R	D	D	M	T	I	V	R	E	E	I	F	G	P	V	M	S	I	L	V	Y	D	D	E	D	E
Template Known Secondary structure		S	B				S																		T	T								S				S	G	G	G	G	G	T	T									S			T	T	S					S				S	S								S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	S	M	A	N	D	S	D	Y	G	L	T	S	S	I	Y	T	Q	N	L	N	V	A	M	K	A	I	K	G	L	K	F	G	E	T	Y	I	N	R	E	N	F	E	A	M	Q	G	F	H	A	G	W	R	K	S	G	I	G	G	A	D	G	K	H	G	L	H	E	Y	L	Q	T	Q	V	V	Y	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	R	R	A	N	D	T	E	Y	G	L	A	A	G	V	V	T	Q	D	L	A	R	A	H	R	A	I	H	R	L	E	A	G	I	C	W	I	N	T	W	G	E	S	P	A	E	M	P	V	G	G	Y	K	Q	S	G	V	G	R	E	N	G	L	T	T	L	A	H	Y	T	R	I	K	S	V	Q	V	E
Template Known Secondary structure									S	S			S							S															S					S							T	T	S		B			S	G	G	G			S		B	S							T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.