Job Description P25553 Confidence 100.00% Date Thu Jan 5 11:42:11 GMT 2012 Rank 44 Aligned Residues 367 % Identity 19% Template c2h5gA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:delta 1-pyrroline-5-carboxylate synthetase; PDBTitle: crystal structure of human pyrroline-5-carboxylate synthetase Resolution 2.25 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.												.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	K	A	I	D	A	A	E	R	A	Q	P	E	W	E	A	L	P	A	I	E	R	A	S	W	L	R	K	I	S	A	G	I	R	E	R	A	S	E	I	S	A	L	I	V	E	E	G	G	K	I	.	.	.	.	.	.	.	.	.	.	.	Q	Q	L	A	E	V	E	V	A	F	T	A	D	Y	I	D	Y
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	Q	Q	G	E	X	A	R	S	G	G	R	X	L	A	T	L	E	P	E	Q	R	A	E	I	I	H	H	L	A	D	L	L	T	D	Q	R	D	E	I	L	L	A	N	K	K	D	L	E	E	A	E	G	R	L	A	A	P	L	L	K	R	L	S	L	S	T	S	K	L	N	S	L	A	I	G	L	R	Q
Template Known Secondary structure																			S																			T																T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		M	A	E	W	A	R	R	Y	E	G	E	I	I	Q	S	D	R	.	.	P	G	E	N	I	L	L	F	K	R	A	L	G	V	T	T	G	I	L	P	W	N	F	P	F	F	L	I	A	R	K	M	A	P	A	L	L	T	G	N	T	I	V	I	K	P	S	E	F	T	P	N	N	A	I	A	F	A	K	I	V
Query Conservation																			.	.
Alig confidence																			.	.																			.						.
Template Conservation																																							.						.
Template Sequence		I	A	A	S	S	Q	D	S	V	G	R	V	L	R	R	T	R	I	A	K	N	L	E	L	E	Q	V	T	V	P	I	G	V	L	L	V	I	.	F	E	S	R	P	.	D	C	L	P	Q	V	A	A	L	A	I	A	S	G	N	G	L	L	L	K	G	G	K	E	A	A	H	S	N	R	I	L	H	L	L	T
Template Known Secondary structure							T	T	S	T	T										T	T																	.		S	S		T	.	T													T									G	G	G
Template Predicted Secondary structure																																							.						.
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.		.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		193	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		D	E	I	G	L	P	R	G	V	.	.	.	F	N	L	V	L	G	R	G	E	T	V	G	Q	E	L	A	G	N	P	K	V	A	M	V	S	M	T	G	S	V	S	A	G	E	K	I	M	A	T	A	A	K	N	I	T	K	V	C	L	E	L	G	G	K	A	P	A	I	V	M	D	D	A	D	L	E	L	A
Query Conservation											.	.	.
Alig confidence											.	.	.									.	.	.	.	.	.	.	.																									.	.
Template Conservation																						.	.	.	.	.	.	.	.																									.	.
Template Sequence		Q	E	A	L	S	I	H	G	V	K	E	A	V	Q	L	V	N	T	R	E	.	.	.	.	.	.	.	.	E	V	K	X	I	D	L	I	I	P	R	G	S	S	Q	L	V	R	D	I	Q	K	A	A	.	.	K	G	I	P	V	X	G	H	S	E	G	I	C	H	X	Y	V	D	S	E	A	S	V	D	K	V
Template Known Secondary structure							T	T	T		G	G	G						T	T		.	.	.	.	.	.	.	.						S						S													.	.	S	S	S		B		S		S										T	T			T	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540									.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.			.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	A	I	V	D	S	R	V	I	N	S	G	Q	V	C	N	C	A	E	R	V	Y	V	Q	K	G	I	Y	D	Q	F	V	N	R	L	G	E	A	M	Q	A	V	Q	F	G	N	P	A	E	R	N	D	I	A	M	G	P	L	I	N	A	A	A	L	E	R	V	E	Q	K	V	A	R	A	V	E	E	G	A
Query Conservation
Alig confidence											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	L	V	R	D	S	K	C	.	E	Y	P	A	A	C	N	A	L	E	T	L	L	I	H	R	D	L	L	R	T	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	Q	I	I	D	X	L	R	V	E	Q	V
Template Known Secondary structure											.	S		T	T	S	T	T	S								G	G	G	T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure											.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		598	.	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.																																			630	.	.	.	.	.	.	.	.	.	640	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	F	G	G	K	A	V	E	G	K	G	Y	Y	Y	P	P	T	L	L	L	D	V	R	Q	E	M	S	I	M	H	E	E	T	F	G	P	V	L	P	V	V	A	F	D	T	L	E	D	A	I	S	M	A	N	D	S	D	Y	G	L	T	S	S	I	Y	T	Q	N	L	N	V	A	M	K	A	I	K	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	H	A	G	P	K	F	A	S	K	S	L	R	T	E	Y	G	D	L	E	L	C	I	E	V	V	D	N	V	Q	D	A	I	D	H	I	H	K	Y	G	S	S	H	T	D	V	I	V	T	E	D	E	N	T	A	E	F	F	L	Q	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S					S	S								S	S														S	S							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.					.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		L	K	F	G	E	T	Y	I	N	R	E	N	F	E	A	M	Q	G	F	H	A	G	W	R	K	S	G	I	.	.	.	.	G	G	A	D	G	K	H	G	L	H	E	Y	L	Q	T	Q	V	V	Y	L
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.
Template Conservation
Template Sequence		V	D	S	A	C	V	F	W	N	A	S	T	R	F	S	D	G	Y	R	F	G	L	G	A	E	V	G	I	S	T	S	R	I	H	A	R	G	P	V	G	L	E	G	L	L	T	T	K	W	L	L	R
Template Known Secondary structure				S	S					S	S		G	G	G		S	T	T	T	T	T	S	S			S						S	S	S							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.