Return to main results Retrieve Phyre Job Id

Job DescriptionP25553
Confidence21.79%DateThu Jan 5 11:42:11 GMT 2012
Rank67Aligned Residues40
% Identity18%Templatec2crjA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:swi/snf-related matrix-associated actin- PDBTitle: solution structure of the hmg domain of mouse hmg domain2 protein hmgx2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80........
Predicted Secondary structure 


Query SS confidence 







































Query Sequence  AIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISA
Query Conservation 

  
  
   
       
   
   
  
      

 
Alig confidence 







































Template Conservation    

 
 
   
  

  

  
   
      
      
Template Sequence  FPEITKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELWA
Template Known Secondary structure  T

TT
Template Predicted Secondary structure 



Template SS confidence 







































   35....40.........50.........60.........70....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions