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Job DescriptionP25553
Confidence100.00%DateThu Jan 5 11:42:11 GMT 2012
Rank46Aligned Residues362
% Identity22%Templatec1vluB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:gamma-glutamyl phosphate reductase; PDBTitle: crystal structure of gamma-glutamyl phosphate reductase (yor323c) from2 saccharomyces cerevisiae at 2.40 a resolution
Resolution2.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80.........90.........100.... .....110.
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Query Sequence  DARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVE. . . . . . . . . . . . . VAFTADY
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Template Sequence  SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVXLQG
Template Known Secondary structure  TTS
TS


STT
TTSTT
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   112.......120...... ...130.........140.........150.........160.........170.........180.........190
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Query Sequence  IDYMAEWARRYEGEI. IQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAK
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Template Sequence  IKDVAELEDPVGKVKXARELDDGLTLYQVTAPVGVLLVIFESRPEV. . IANITALSIKSGNAAILKGGKESVNTFREXAK
Template Known Secondary structure  S

SSS
TT




GGG..TTTT

GGG
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   83......90.........100.........110.........120........ .130.........140.........150.........160
 
   191.... ....200.........210.........220.........230.........240.........250.........260..
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Query Sequence  IVDEI. . . . . . . . GLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELGGKAPAIVMD
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Template Sequence  IVNDTIAQFQSETGVPVGSVQLIET. . . DVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK. . . IPVLGHADGICSIYLDE
Template Known Secondary structure  T


TTS


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TT
TTT

S
T
S...S
BTT

S

T
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   161........170.........180..... ....190.........200.........210....... ..220.........230....
 
   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  DADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVA
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Template Sequence  DADLIKAKRISLDAKT. . . . . . NNAXETLLINPKFSKWW. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EVLEN
Template Known Secondary structure  T


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   237..240.........250.. .......260......... 270....
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  RAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNV
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Template Sequence  LTLEGGVTIHATKDLK. . TAYFDKLNELGKLTEAIQCKTVDADSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKAN
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..T


TT





STTS
SS


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   280.........290..... ....300.........310.........320.........330.........340.........350.......
 
   423......430.........440.........450.........460.........470......
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Query Sequence  AMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVY
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Template Sequence  AEKFXKGVDSSGVYWNASTRFADG. . . . . . . . . . . . . . . . . . GLDGLVSYQYQI
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SSSS
GGGG

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   368.370.........380.........390. ........400...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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