Job Description P0AER0 Confidence 100.00% Date Wed Jan 25 15:20:31 GMT 2012 Rank 11 Aligned Residues 239 % Identity 31% Template c3d9sB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:aquaporin-5; PDBTitle: human aquaporin 5 (aqp5) - high resolution x-ray structure Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	S	T	L	K	G	Q	C	I	A	E	F	L	G	T	G	L	L	I	F	F	G	V	G	C	V	A	A	L	K	V	A	G	A	S	F	G	Q	W	E	I	S	V	I	W	G	L	G	V	A	M	A	I	Y	L	T	A	G	V	S	G	A	H	L	N	P	A	V	T	I	A	L	W	L	F	A	C	F	D
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		C	S	V	A	F	L	K	A	V	F	A	E	F	L	A	T	L	I	F	V	F	F	G	L	G	S	.	.	A	L	K	W	P	S	A	L	P	T	I	L	Q	I	A	L	A	F	G	L	A	I	G	T	L	A	Q	A	L	G	P	V	S	G	G	H	I	N	P	A	I	T	L	A	L	L	V	G	N	Q	I	S
Template Known Secondary structure		S	S																								T	.	.	T	S			T	T	S																																									T	T		S
Template Predicted Secondary structure																												.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	V	I	P	F	I	V	S	Q	V	A	G	A	F	C	A	A	A	L	V	Y	G	L	Y	Y	N	L	F	F	D	F	E	Q	T	H	H	I	V	R	G	S	V	E	S	V	D	L	A	G	T	F	S	T	Y	P	N	P	H	I	N	F	V	Q	A	F	A	V	E	M	V	I	T	A	I	L	M	G	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	R	A	F	F	Y	V	A	A	Q	L	V	G	A	I	A	G	A	G	I	L	Y	G	V	A	P	L	N	A	R	G	N	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	N	A	L	N	N	N	T	T	Q	G	Q	A	M	V	V	E	L	I	L	T	F	Q	L	A	L	C
Template Known Secondary structure																											S						T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	A	L	T	D	D	G	N	G	V	P	R	G	P	L	A	P	L	L	I	G	L	L	I	A	V	I	G	A	S	M	G	P	L	T	G	F	A	M	N	P	A	R	D	F	G	P	K	V	F	A	W	L	A	G	W	G	N	V	A	F	T	G	G	R	D	I	P	Y	F	L	V	P	L	F	G	P	I	V
Query Conservation
Alig confidence																	.																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	A	S	T	D	S	R	R	T	S	P	V	G	S	.	P	A	L	S	I	G	L	S	V	T	L	G	H	L	V	G	I	Y	F	T	G	C	S	M	N	P	A	R	S	F	G	P	A	V	V	M	.	.	.	.	.	.	.	.	.	.	.	.	N	R	F	S	P	A	H	W	V	F	W	V	G	P	I	V
Template Known Secondary structure						T		S	S			S					.																					S			S	S											T	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T	T	T
Template Predicted Secondary structure																	.																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.													.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	V	G	A	F	A	Y	R	K	L	I	G	R	H	L	P	C	D	I	C	V	V	E	E	K	E	T	T	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	V	L	A	A	I	L	Y	F	Y	L	L	F	P	N	S	L	S	L	S	E	R	V	A	I	I	K	G	T	Y	E
Template Known Secondary structure												T	T	T	S															T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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