Job Description P0AER0 Confidence 2.79% Date Wed Jan 25 15:20:31 GMT 2012 Rank 93 Aligned Residues 30 % Identity 37% Template c2v3nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:transcobalamin-2; PDBTitle: crystallographic analysis of upper axial ligand2 substitutions in cobalamin bound to transcobalamin Resolution 2.73 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.																																					80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	A	H	L	N	P	A	V	T	I	A	L	W	L	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	F	D	K	R	K	V	I	P	F	I	V	S
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	E	Q	L	N	P	S	I	Y	V	G	L	R	L	S	S	L	Q	A	G	A	K	E	A	H	Y	L	H	S	L	K	L	S	Y	Q	Q	S	L	L	R	P	A	S	N	K	D	D	N	D	S	E	A	K	P	S	M	G	Q	L	A	L	Y	L	L	A
Template Known Secondary structure		S	T	T	T											T	S	S				T	T																		S			S	S		T	T		S		S	S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions