Return to main results Retrieve Phyre Job Id

Job DescriptionP31443
Confidence10.08%DateThu Jan 5 11:47:35 GMT 2012
Rank94Aligned Residues36
% Identity14%Templated2b4jc1
SCOP infoN-cbl like HIV integrase-binding domain HIV integrase-binding domain
Resolution2.02

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30......
Predicted Secondary structure 





Query SS confidence 



































Query Sequence  MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQR
Query Conservation        
      
 



   
  
 


 


 
Alig confidence 



































Template Conservation   
  
 
 







  
  

 

  

 




Template Sequence  QKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNM
Template Known Secondary structure  TTTT
TT

Template Predicted Secondary structure 




Template SS confidence 



































   391........400.........410.........420......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions