 |
Job Description | P31443 | Confidence | 13.37% | Date | Thu Jan 5 11:47:35 GMT 2012 |
Rank | 65 | Aligned Residues | 31 |
% Identity | 13% | Template | c3dhuC_ |
PDB info |
PDB header:hydrolase | Chain: C: PDB Molecule:alpha-amylase; |
PDBTitle: crystal structure of an alpha-amylase from lactobacillus2 plantarum
|
Resolution | 2.00 Å |
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | N | F | K | Q | R | G | I | R | S | V | Q | L | I | P | Y | L | E | F | D | D | R | G | D | L | T | A | A | S | V | T |
Query Conservation |   |
  |
|
|
|   |
|
|   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
Q | R | I | K | D | L | G | T | D | I | L | W | L | L | P | I | N | P | I | G | E | V | N | R | K | G | T | L | G | S | P |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
| S |
| B |
|
| T | T |
|
| T | T | T |
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|