 |
Job Description | P31443 | Confidence | 14.96% | Date | Thu Jan 5 11:47:35 GMT 2012 |
Rank | 56 | Aligned Residues | 47 |
% Identity | 13% | Template | c1jd7A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:alpha-amylase; |
PDBTitle: crystal structure analysis of the mutant k300r of2 pseudoalteromonas haloplanctis alpha-amylase
|
Resolution | 2.25 Å |
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | D | F | Y | H | N | F | K | Q | R | G | I | R | S | V | Q | L | I | P | Y | L | E | F | D | D | R | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | T | A | A | S | V | T | A | E | L | W | G | K | F | L | I | A | L |
Query Conservation |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |   |
|
|
|
|
|   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|   |   |   |
|
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
|   |   |
|
|
|   |
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|
|   |
|   |   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|
Template Sequence |   |
A | Q | E | C | E | Q | Y | L | G | P | K | G | Y | A | A | V | Q | V | S | P | P | N | E | H | I | T | G | S | Q | W | W | T | R | Y | Q | P | V | S | Y | E | L | Q | S | R | G | G | N | R | A | Q | F | I | D | M | V | N | R | C |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |  |  |  |  | T |
|
|  |  |  |  |
|
|
| S |
| B | B |
| S | S | S | G | G | G | G | G | S | B | S |
| S | S | S |
| B | T | T | B |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|