Return to main results Retrieve Phyre Job Id

Job DescriptionP31443
Confidence32.30%DateThu Jan 5 11:47:35 GMT 2012
Rank21Aligned Residues42
% Identity21%Templatec1bf2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:isoamylase; PDBTitle: structure of pseudomonas isoamylase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.... .....60.. .......70..
Predicted Secondary structure 












.......................






......
Query SS confidence 























. . . . . . . . . . . . . . . . . . . . . . .







. . . . . .









Query Sequence  HNFKQRGIRSVQLIPYLEFDDRGD. . . . . . . . . . . . . . . . . . . . . . . LTAASVTA. . . . . . ELWGKFLIAL
Query Conservation   


 

   




 

      .......................    


 ......  

 

  
Alig confidence 























.......................







......









Template Conservation 



 



 
 



 
                  


    
 

   


         


 

  
Template Sequence  SYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAF
Template Known Secondary structure  T

S

B
BS
TTTTSSTT

TT


S


BS
SS
B
GGG
S

STT
Template Predicted Secondary structure 


















































Template SS confidence 






































































   212.......220.........230.........240.........250.........260.........270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions