Job Description P00582 Confidence 88.21% Date Thu Jan 5 10:56:46 GMT 2012 Rank 117 Aligned Residues 141 % Identity 16% Template d2py5a1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	P	V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	N	L	V	G	L	S	F	A	I	E	P	G	V	A	A	Y	I	P	V	A	H	D	Y	L	D	A	P	D	Q	I	S	R	E	R	A	L	E	L	L	K	P	L	L	E	D	E	K	A	L	K	V	G	Q	N	L	K	Y	D	R	G	I
Query Conservation
Alig confidence													.																										.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation													.																										.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		P	R	K	M	Y	S	C	A	F	E	T	.	T	T	K	V	E	D	C	R	V	W	A	Y	G	Y	M	N	I	E	D	H	S	E	Y	K	I	.	.	.	.	.	.	.	.	.	.	G	N	S	L	D	E	F	M	A	W	V	L	K	V	.	.	.	.	Q	A	D	L	Y	F	H	N	L	K	F	A	G	A	F
Template Known Secondary structure													.			B	T	T	B											S	S		T	T					.	.	.	.	.	.	.	.	.	.		S													.	.	.	.							T	T
Template Predicted Secondary structure													.																										.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40											.	.	.	.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		428	.	430	.	.																				.	.	.	.	.																				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	N	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	L	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E	R	W	L	K	H	K
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.						.	.	.	.
Template Conservation																																																							.	.	.	.						.	.	.	.
Template Sequence		I	I	N	W	L	E	R	N	G	F	K	W	S	A	D	G	L	P	N	T	Y	N	T	I	I	S	R	M	G	Q	W	Y	M	I	D	I	C	L	G	Y	K	G	K	R	K	I	H	T	V	I	Y	D	S	.	.	.	.	L	K	K	L	P	.	.	.	.	F	P	V	K	K	I	A	K	D	F	K	L	T	V
Template Known Secondary structure									T	T					T	T			T	T								T	T														T	T											.	.	.	.				S		.	.	.	.	S									T	T
Template Predicted Secondary structure																																																							.	.	.	.						.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D
Query Conservation
Alig confidence										.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		L	K	G	D	I	D	Y	H	.	.	.	.	K	E	R	P	V	G	Y	K	I	T	P	E	E	Y	A	Y	I	K	N	D	I	Q	I	I	A	E	A	L	L	I	Q	F	K	Q
Template Known Secondary structure			S	S				T	T	.	.	.	.	S				T	T																												T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions