Job Description P00582 Confidence 98.55% Date Thu Jan 5 10:56:46 GMT 2012 Rank 56 Aligned Residues 152 % Identity 16% Template d2f96a1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.09

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		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.										.	.	.	.	.	.	380	.	.	.	.	.	.	.																		.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	E	K	A	P	V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	N	L	V	G	L	S	F	.	.	.	.	.	.	.	.	.	A	I	E	P	G	V	A	A	Y	I	P	V	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	L	D	A	P	D	Q	I	S	R
Query Conservation																															.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	F	R	G	Y	L	P	V	V	V	D	V	E	T	G	G	F	N	S	A	T	D	A	L	L	E	I	A	A	T	T	V	G	X	D	E	K	G	F	L	F	P	E	H	T	Y	F	F	R	I	E	P	F	E	G	A	N	I	E	P	A	A	L	E	F	T	G	I	K	L	D	H	P	L	R	X	A	V	Q	E
Template Known Secondary structure			T	T	T											S	S	S		T	T	T	B														T	T	S												B				T	T		B										T			T	T		T	T				B
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.								.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430					.	.	.	.	.	.	.	.					.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.																				.	.	.	.									.	.	.	.
Query SS confidence															.	.	.	.	.	.	.																				.	.	.	.									.	.	.	.
Query Sequence		E	R	A	L	E	L	L	K	P	L	L	E	D	.	.	.	.	.	.	.	E	K	A	L	K	V	G	Q	N	L	K	Y	D	R	G	I	L	A	N	.	.	.	.	Y	G	I	E	L	R	G	I	.	.	.	.	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E
Query Conservation															.	.	.	.	.	.	.																				.	.	.	.									.	.	.	.
Alig confidence															.	.	.	.	.	.	.																				.	.	.	.									.	.	.	.															.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		E	A	A	L	T	E	I	F	R	G	I	R	K	A	L	K	A	N	G	C	K	R	A	I	L	V	G	H	N	S	S	F	D	L	G	F	L	N	A	A	V	A	R	T	G	I	K	R	N	P	F	H	P	F	S	S	F	D	T	A	T	L	A	G	L	A	Y	G	Q	.	.	.	T	V	L	A	K	A	C	Q
Template Known Secondary structure																			T	T		S							T	T																T																							S		.	.	.		S
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.
		464	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		R	W	L	.	K	H	K	T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L	Q	K	H	K	G
Query Conservation					.
Alig confidence					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	G	X	E	F	D	N	R	E	A	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	Y	D	T	E	K	T	A	E	L	F	C	G	I	V	N	R	W	K	E	X	G	G
Template Known Secondary structure			T	T					T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.																							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions