Job Description P00582 Confidence 98.50% Date Thu Jan 5 10:56:46 GMT 2012 Rank 58 Aligned Residues 167 % Identity 22% Template d2d5ra1 SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.50

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		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.																								.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.							.	380	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		E	E	T	L	K	A	W	I	A	K	L	E	K	A	P	V	F	A	F	D	T	E	T	D	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	I	S	A	N	L	V	G	L	S	F	A	I	E	P	G	.	.	.	.	.	.	V	A	A	Y	I	P	V	A
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	E	M	K	K	I	R	Q	V	I	R	K	Y	N	Y	V	A	M	D	T	E	F	P	G	V	V	A	R	P	I	G	E	F	R	S	N	A	D	Y	Q	Y	Q	L	L	R	C	N	V	D	L	L	K	I	I	Q	L	G	L	T	F	M	N	E	Q	G	E	Y	P	P	G	T	S	T	W	Q	F	N	F	K
Template Known Secondary structure																																	S			S	S														T	T													T	T	S				S	S								B
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.																											.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430			.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		H	D	Y	L	D	A	P	D	Q	I	S	R	E	R	A	L	E	L	L	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	D	E	K	A	L	K	V	G	Q	N	L	K	Y	D	R	G	I	L	A	N	.	.	Y	G	I	E	L	R	G	I
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence		.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	F	N	L	T	E	D	M	Y	A	Q	D	S	I	E	L	L	T	T	S	G	I	Q	F	K	K	H	E	E	E	G	I	E	T	Q	Y	F	A	E	L	L	M	T	S	G	V	V	L	C	E	G	V	K	W	L	S	F	H	S	G	Y	D	F	G	Y	L	I	K	I	L	T	N	S	N	L	P	E	E
Template Known Secondary structure		.	.	.			T	T	T	S														T											B											T	T	T	S	S	S	S	S	S						S	S														T	S				S	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
																439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E	R	W	L	K	H	K	T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	D	F	F	E	I	L	R	L	F	F	P	V	I	Y	D	V	K	Y	L	M	K	S	C	.	.	K	N	L	K	G	G	L	Q	E	V	A	E	Q	L	E	L	E	R	I	G	P	Q	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	S	D	S	L	L
Template Known Secondary structure														S									G	G	G		.	.	T	T			S	S									T					S	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																							.	.	.	230	.	.	.
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	Q	L	H	L	K	M	W	P	D	L	Q	K	H	K	G	P	L	N	V	F	E	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	M	A	F	F	K	M	R	E	M	F	F	E	D	H	I	D	D	A	K	Y	C	G	H
Template Known Secondary structure													T	S		S	S							T	T	B
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions