Job Description P00582 Confidence 98.72% Date Thu Jan 5 10:56:46 GMT 2012 Rank 50 Aligned Residues 146 % Identity 16% Template d1y97a1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.50

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		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.																		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.																		.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	A	P	V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	N	L	V	G	L	S	F	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	G	V	A	A	Y	I	P	V	A	H	D	Y	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	E	T	F	V	F	L	D	L	E	A	T	G	L	P	S	V	E	P	E	I	A	E	L	S	L	F	A	V	H	R	S	S	L	E	N	P	E	H	G	A	L	V	L	P	R	V	L	D	K	L	T	L	C	X	C	P	E	R	P	F	T	A	K	A	S	E	I	T	G	L	S	S	E	G	L	A	R	C
Template Known Secondary structure				S										S	S		G	G	G																		T	S		B					B			S	S											S	S																				T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.			.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430							.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																					.	.											.										.	.	.	.	.	.
Query SS confidence																					.	.											.										.	.	.	.	.	.
Query Sequence		P	D	Q	I	S	R	E	R	A	L	E	L	L	K	P	L	L	E	D	.	.	E	K	A	L	K	V	G	Q	N	L	.	K	Y	D	R	G	I	L	A	N	.	.	.	.	.	.	Y	G	I	E	L	R	G	I	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E
Query Conservation																					.	.											.										.	.	.	.	.	.
Alig confidence																					.	.											.										.	.	.	.	.	.																						.
Template Conservation																																																																						.
Template Sequence		R	K	A	G	F	D	G	A	V	V	R	T	L	Q	A	F	L	S	R	Q	A	G	P	I	C	L	V	A	H	N	G	F	D	Y	D	F	P	L	L	C	A	E	L	R	R	L	G	A	R	L	P	R	D	T	V	C	L	D	T	L	P	A	L	R	G	L	D	R	.	A	H	G	Y	S	L	G	S	L	F	H
Template Known Secondary structure		T				S													T	T	S		S	S						T	T	T	T	T	T													T					T	T																.					S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	W	L	K	H	K	T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L	Q	K
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	F	R	A	E	P	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	G	D	V	H	T	L	L	L	I	F	L	H	R	A	A	E	L	L	A
Template Known Secondary structure					S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.																										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions