Job Description P00582 Confidence 99.05% Date Thu Jan 5 10:56:46 GMT 2012 Rank 46 Aligned Residues 154 % Identity 21% Template d1x9ma1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	N	L	V	G	L	S	F	A	I	E	P	G	V	A	A	Y	I	P	V	A	H	D	Y	L	D	A	P	D	Q	I	S	R	E	R	A	L	E	L	L	K	P	L	L	E	D	E	K	A	L	K	V	G	Q	N	.	L	K	Y	D	R	G	I	L	A
Query Conservation																																																																								.
Alig confidence																																				.	.	.	.	.	.	.	.	.																							.					.
Template Conservation																																				.	.	.	.	.	.	.	.	.																							.
Template Sequence		M	I	V	S	D	I	E	A	N	A	L	L	E	S	V	T	K	F	H	C	G	V	I	Y	D	Y	S	T	A	E	Y	V	S	Y	.	.	.	.	.	.	.	.	.	R	P	S	D	F	G	A	Y	L	D	A	L	E	A	E	V	A	R	G	G	L	I	.	V	F	H	N	G	H	K	Y	D	V	P	A	L	T
Template Known Secondary structure										S	S		G	G	G												T	T	T	T						.	.	.	.	.	.	.	.	.		G	G	G														T	T				.			S	S	T	T	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.																							.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.										.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70
		430									.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.																			.	480	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	.	.	.	.	.	.	.	.	Y	G	I	E	L	R	G	I	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E	R	W	L	K	H	K	T	I	T	F	E	E	I	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	K	N	Q
Query Conservation			.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	A	K	L	Q	L	N	R	E	F	H	L	P	R	E	N	C	I	D	T	L	V	L	S	R	L	I	H	S	N	L	K	D	T	D	M	G	L	L	R	S	G	K	L	P	G	A	L	E	A	W	G	Y	R	L	G	E	M	K	G	E	Y	K	D	D	F	K	R	M	L	E	E	Q	G	E	E	Y	V	D
Template Known Secondary structure																G	G	G												T	T	T	S				T	T	T	T	S		G	G	G	S		S																											T	T					T
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	M	E	W	W	N	F	N	E	E	M	M	D	Y	N	V	Q	D	V	V	V	T	K	A	L	L	E	K	L	L	S
Template Known Secondary structure		T	G	G	G	T	S																									T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions