Job Description P00582 Confidence 98.67% Date Thu Jan 5 10:56:46 GMT 2012 Rank 53 Aligned Residues 177 % Identity 16% Template d1uoca_ SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.3

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.				.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.												.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.																															.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																					.	.	.																															.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		P	E	V	T	A	T	V	I	S	Y	D	N	Y	V	T	I	L	D	E	.	.	.	E	T	L	K	A	W	I	A	K	L	E	K	A	P	V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	.	.	.	.	.	.	.	.	.	.	.	N	L	V	G	L	S	F	A	I	E	P	G	V	.	.	.	.
Query Conservation																					.	.	.																															.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence																					.	.	.																															.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		P	P	I	F	L	P	P	P	N	Y	L	F	V	R	D	V	W	K	S	N	L	Y	S	E	F	A	V	I	R	Q	L	V	S	Q	Y	N	H	V	S	I	S	T	E	F	V	G	S	K	V	D	Y	H	Y	Q	T	M	R	A	N	V	D	F	L	N	P	I	Q	L	G	L	S	L	S	D	A	N	G	N	K	P
Template Known Secondary structure									G	G	G	G							T	T	T												T	T	T	S																										T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
							380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.																											.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	A	A	Y	I	P	V	A	H	D	Y	L	D	A	P	D	Q	I	S	R	E	R	A	L	E	L	L	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	D	E	K	A	L	K	V	G	Q	N	L	K	Y	D	R	G	I	L
Query Conservation		.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.							.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		D	N	G	P	S	T	W	Q	F	N	F	.	.	.	E	F	D	P	K	K	E	I	M	S	T	E	S	L	E	L	L	R	K	S	G	I	N	F	E	K	H	E	N	L	G	I	D	V	F	E	F	S	Q	L	L	M	D	S	G	L	M	M	D	D	S	V	T	W	I	T	Y	H	A	A	Y	D	L	G	F	L
Template Known Secondary structure		S	S	S		S						B	.	.	.				T	T															T	T											B											T	S	S		S	S		T	T	S					S	S	T	T
Template Predicted Secondary structure													.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		429	430			.	.	.	.	.	.	.	.															.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure				.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	.	.	Y	G	I	E	L	R	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E	R	W	L	K	H	K	T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E
Query Conservation				.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	I	L	M	N	D	S	M	P	N	N	K	E	D	F	E	W	W	V	H	Q	Y	M	P	N	F	Y	D	L	N	L	V	Y	K	I	I	Q	E	F	K	N	Q	Y	S	L	T	T	L	A	D	E	L	G	L	P	R	F	S	I	F	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S				S	S													S	S												T	T	T					S								T	T					G	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L	Q	K	H
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	T	G	G	Q	S	L	L	M	L	L	S	F	C	Q	L	S	K	L	S	M	H	K
Template Known Secondary structure		.	.	.	.	.																			T	T	T	B
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions