Job Description P00582 Confidence 98.47% Date Thu Jan 5 10:56:46 GMT 2012 Rank 60 Aligned Residues 168 % Identity 23% Template d1s5ja1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.40

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		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.							.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.											.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.						.	.																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.						.	.																													.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	A	P	V	F	A	F	D	T	E	T	D	S	L	.	.	.	.	.	.	D	N	I	S	A	.	.	N	L	V	G	L	S	F	A	I	E	P	G	V	A	A	Y	I	P	V	A	H	D	Y	L	D	A	P	D	.	.	.	.	.	.	.	.	.	.	Q	I	S	R	E	R	A	L	E	L	L	K	P	L
Query Conservation																	.	.	.	.	.	.						.	.																													.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.						.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	I	K	R	V	A	I	D	I	E	V	Y	T	P	V	K	G	R	I	P	D	S	Q	K	A	E	F	P	I	I	S	I	A	L	A	G	S	D	G	L	K	K	V	L	V	L	N	R	N	D	V	N	E	G	S	V	K	L	D	G	I	S	V	E	R	F	N	T	E	Y	E	L	L	G	R	F	F	D	I
Template Known Secondary structure																S	S	S	S					T	T	T			S										T	T	S									S	S										T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		409	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430					.	.	.	.																								.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure														.											.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.											.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	D	E	K	A	L	K	V	G	Q	N	.	L	K	Y	D	R	G	I	L	A	N	.	.	.	.	Y	G	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	G	I	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S
Query Conservation														.											.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.					.											.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		L	L	E	Y	P	I	V	.	L	T	F	N	G	D	D	F	D	L	P	Y	I	Y	F	R	A	L	K	L	G	Y	F	P	E	E	I	P	I	D	V	A	G	K	D	E	A	K	Y	L	A	G	L	H	I	D	L	Y	K	F	F	F	N	K	A	V	R	N	Y	A	F	E	G	K	Y	N	E	Y	N	L	D	A
Template Known Secondary structure			T	T		S			.			S	S	T	T	T	T											T	T	T			G	G	G		S					S	T	T					T	T	S										T	S							T	S	T	T			S	S		S
Template Predicted Secondary structure									.
Template SS confidence
		303	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	R	W	L	K	H	K	T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L	Q	K	H	K	G	P	L	N	V	F	E	N	I	E	M	P	L	V	P	V	L	S	R	I
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	K	A	L	L	G	.	.	.	.	.	.	.	.	.	.	.	T	S	K	V	D	T	L	I	S	F	L	D	V	E	K	L	I	E	Y	N	F	R	D	A	E	I	T	L	Q	L	T	T	F	N	N	D	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	L	I	V	L	F	S	R	I
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.					S	S		T	T	T																				T	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		382	.	.	.	.	.	.												.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.															.	.	.	430	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions