Job Description P00582 Confidence 100.00% Date Thu Jan 5 10:56:46 GMT 2012 Rank 6 Aligned Residues 407 % Identity 49% Template d1qtma2 SCOP info DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I Resolution 2.30

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		519	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	G	P	L	N	V	F	E	N	I	E	M	P	L	V	P	V	L	S	R	I	E	R	N	G	V	K	I	D	P	K	V	L	H	N	H	S	E	E	L	T	L	R	L	A	E	L	E	K	K	A	H	E	I	A	G	E	E	F	N	L	S	S	T	K	Q	L	Q	T	I	L	F	E	K	Q	G	I	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	R	L	L	W	L	Y	R	E	V	E	R	P	L	S	A	V	L	A	H	M	E	A	T	G	V	R	L	D	V	A	Y	L	R	A	L	S	L	E	V	A	E	E	I	A	R	L	E	A	E	V	F	R	L	A	G	H	P	F	N	L	N	S	R	D	Q	L	E	R	V	L	F	D	E	L	G	L	P	A
Template Known Secondary structure												T																																														T	S				T	T											T	T	S
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
		599	600	.	.	.		.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		L	K	K	T	P	.	G	G	A	P	S	T	S	E	E	V	L	E	E	L	A	L	D	Y	P	L	P	K	V	I	L	E	Y	R	G	L	A	K	L	K	S	T	Y	T	D	K	L	P	L	M	I	N	P	K	T	G	R	V	H	T	S	Y	H	Q	A	V	T	A	T	G	R	L	S	S	T	D	P	N	L	Q
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		I	G	K	T	E	K	T	G	K	R	S	T	S	A	A	V	L	E	A	L	R	E	A	H	P	I	V	E	K	I	L	Q	Y	R	E	L	T	K	L	K	S	T	Y	I	D	P	L	P	D	L	I	H	P	R	T	G	R	L	H	T	R	F	N	Q	T	A	T	A	T	G	R	L	S	S	S	D	P	N	L	Q
Template Known Secondary structure				B		T	T	T			B										T	T	T	T		T																		T	T	T	T	G	G	G	G	B		T	T	T	S								S	S			S	S	S						S	S			S
Template Predicted Secondary structure
Template SS confidence
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	P	V	R	N	E	E	G	R	R	I	R	Q	A	F	I	A	P	E	D	Y	V	I	V	S	A	D	Y	S	Q	I	E	L	R	I	M	A	H	L	S	R	D	K	G	L	L	T	A	F	A	E	G	K	D	I	H	R	A	T	A	A	E	V	F	G	L	P	L	E	T	V	T	S	E	Q	R	R	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	P	V	R	T	P	L	G	Q	R	I	R	R	A	F	I	A	E	E	G	W	L	L	V	A	L	D	Y	S	Q	I	E	L	R	V	L	A	H	L	S	G	D	E	N	L	I	R	V	F	Q	E	G	R	D	I	H	T	E	T	A	S	W	M	F	G	V	P	R	E	A	V	D	P	L	M	R	R	A	A
Template Known Secondary structure		S				S	S								T	T					T	T									T	T																					T	T													T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		583	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
		758	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	I	N	F	G	L	I	Y	G	M	S	A	F	G	L	A	R	Q	L	N	I	P	R	K	E	A	Q	K	Y	M	D	L	Y	F	E	R	Y	P	G	V	L	E	Y	M	E	R	T	R	A	Q	A	K	E	Q	G	Y	V	E	T	L	D	G	R	R	L	Y	L	P	D	I	K	S	S	N	G	A	R	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	I	N	F	G	V	L	Y	G	M	S	A	H	R	L	S	Q	E	L	A	I	P	Y	E	E	A	Q	A	F	I	E	R	Y	F	Q	S	F	P	K	V	R	A	W	I	E	K	T	L	E	E	G	R	R	R	G	Y	V	E	T	L	F	G	R	R	R	Y	V	P	D	L	E	A	R	V	K	S	V	R	E
Template Known Secondary structure										T	T											T																	S																		S					T	T							G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
		838	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	R	A	A	I	N	A	P	M	Q	G	T	A	A	D	I	I	K	R	A	M	I	A	V	D	A	W	L	Q	A	E	Q	P	R	V	R	M	I	M	Q	V	H	D	E	L	V	F	E	V	H	K	D	D	V	D	A	V	A	K	Q	I	H	Q	L	M	E	N	C	T	R	L	D	V	P	L	L	V	E
Query Conservation
Alig confidence																																		.	.
Template Conservation																																		.	.
Template Sequence		A	A	E	R	M	A	F	N	M	P	V	Q	G	T	A	A	D	L	M	K	L	A	M	V	K	L	F	P	R	L	E	E	.	.	M	G	A	R	M	L	L	Q	V	H	D	E	L	V	L	E	A	P	K	E	R	A	E	A	V	A	R	L	A	K	E	V	M	E	G	V	Y	P	L	A	V	P	L	E	V	E
Template Known Secondary structure																																		.	.	T	T								S	S								T	T	T														T	S	S			S	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.			.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820
		918	.	920	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	S	G	E	N	W	D	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	I	G	E	D	W	L	S	A
Template Known Secondary structure						S	B
Template Predicted Secondary structure
Template SS confidence
		821	.	.	.	.	.	.	.	.	830

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions