Job Description P00582 Confidence 98.70% Date Thu Jan 5 10:56:46 GMT 2012 Rank 52 Aligned Residues 162 % Identity 23% Template d1qhta1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.10

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		350	.	.	.	.	.	.	.	.	.				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410			.	.	.	.	.	.	.	.	.	420		.	.	.
Predicted Secondary structure												.	.	.																																																				.	.											.
Query SS confidence												.	.	.																																																				.	.											.
Query Sequence		P	V	F	A	F	D	T	E	T	D	.	.	.	S	L	D	N	I	S	A	N	L	V	G	L	S	F	A	I	E	P	G	V	A	A	Y	I	P	V	A	H	D	Y	L	D	A	P	D	Q	I	S	R	E	R	A	L	E	L	L	K	P	L	L	E	.	.	D	E	K	A	L	K	V	G	Q	N	.	L	K	Y
Query Conservation												.	.	.																																																				.	.											.
Alig confidence												.	.	.																																																				.	.						.					.
Template Conservation																																																																									.
Template Sequence		T	M	L	A	F	A	I	A	T	L	Y	H	E	G	E	E	F	G	T	G	P	I	L	M	I	S	Y	A	D	G	S	E	A	R	V	I	T	W	K	K	I	D	L	P	Y	V	D	V	V	S	T	E	K	E	M	I	K	R	F	L	R	V	V	R	E	K	D	P	D	V	L	.	I	T	Y	N	G	D	N	F
Template Known Secondary structure														T	T			T	T		S										S	S							S	S					S	S					S																			S			.			S	S	T	T	T	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.
		424	.	.	.	.	.	430					.	.	.	.	.	.	.																								.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.			.	.	470	.	.	.	.
Predicted Secondary structure									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Query SS confidence									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Query Sequence		D	R	G	I	L	A	N	.	.	.	.	Y	G	I	E	L	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E	R	W	L	K	.	.	H	K	T	I	T	F	E
Query Conservation									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.
Alig confidence									.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																	.	.
Template Conservation																																																								.
Template Sequence		D	F	A	Y	L	K	K	R	C	E	E	L	G	I	K	F	T	L	G	R	D	G	S	E	P	K	I	Q	R	M	G	D	R	F	A	V	E	V	K	G	R	I	H	F	D	L	Y	P	V	I	R	R	T	I	.	N	L	P	T	Y	T	L	E	A	V	Y	E	A	V	F	G	K	P	K	E	K	V	Y	A	E
Template Known Secondary structure													T	T						S	T	T	S									T	T							T	T	S													S	.			S
Template Predicted Secondary structure																																																								.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L	Q	K
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		E	I	A	Q	A	W	E	.	.	.	.	.	S	G	E	G	L	E	R	V	A	R	Y	S	M	E	D	A	K	V	T	Y	E	L	G	R	E	F	F	P	M	E	A	Q
Template Known Secondary structure								T	.	.	.	.	.	T	T		S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300						.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions