 |
Job Description | P00582 | Confidence | 51.10% | Date | Thu Jan 5 10:56:46 GMT 2012 |
Rank | 196 | Aligned Residues | 25 |
% Identity | 20% | Template | d1k6ya1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| N-terminal Zn binding domain of HIV integrase
| N-terminal Zn binding domain of HIV integrase
|
Resolution | 2.40 |
|
  |   |
766 | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | M | S | A | F | G | L | A | R | Q | L | N | I | P | R | K | E | A | Q | K | Y | M | D | L |
Query Conservation |   |
|
|   |
|   |   |   |
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |
|
|   |
|
|   |   |
Template Sequence |   |
Y | H | S | N | W | R | A | M | A | S | D | F | N | L | P | P | V | V | A | K | E | I | V | A | S |
Template Known Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|