Job Description P00582 Confidence 98.28% Date Thu Jan 5 10:56:46 GMT 2012 Rank 63 Aligned Residues 143 % Identity 13% Template d1j9aa_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.50

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		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.																												.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	P	V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	N	L	V	G	L	S	F	A	I	E	P	G	V	A	A	Y	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	H	D	Y	L	D	A	P	D	Q	I	S	R	E	R
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	N	L	I	W	I	D	L	E	X	T	G	L	D	P	E	K	E	R	I	I	E	I	A	T	I	V	T	D	K	N	L	N	I	L	A	E	G	P	V	L	A	V	H	Q	S	D	E	L	L	N	K	X	N	D	W	C	Q	K	T	H	S	E	N	G	L	I	E	R	I	K	A	S	K	L	T	E	R	A
Template Known Secondary structure		T	T										S	S	S		T	T	T													T	T	S									B		B									S	S												T						T	T			B
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.					.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430					.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure													.	.	.	.																				.	.	.	.
Query SS confidence													.	.	.	.																				.	.	.	.
Query Sequence		A	L	E	L	L	K	P	L	L	E	D	.	.	.	.	E	K	A	L	K	V	G	Q	N	L	K	Y	D	R	G	I	L	A	N	.	.	.	.	Y	G	I	E	L	R	G	I	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L	A	E	R	W	L	K	H	K	T	I	T
Query Conservation													.	.	.	.																				.	.	.	.
Alig confidence													.	.	.	.																				.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.
Template Sequence		A	E	L	Q	T	L	D	F	L	K	K	W	V	P	K	G	A	S	P	I	C	G	N	S	I	A	Q	D	K	R	F	L	V	K	Y	X	P	D	L	A	D	Y	F	H	Y	R	H	L	D	V	S	T	L	K	E	L	A	A	R	W	K	P	.	.	.	.	.	.	.	.	E	I	L	E	G	F	K	K	E	N
Template Known Secondary structure											T	T	T	S		T	T	T	S					S	S																		S	S		S																	G	.	.	.	.	.	.	.	.	G	G	G	G	G
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L	Q	K	H	K
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	D	D	I	R	E	S	I	K	E	L	A	Y	Y	R	E	H	F	X	K	L	D
Template Known Secondary structure			S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.																							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions