Job Description P00582 Confidence 99.54% Date Thu Jan 5 10:56:46 GMT 2012 Rank 42 Aligned Residues 137 % Identity 23% Template d1b43a2 SCOP info PIN domain-like PIN domain-like 5' to 3' exonuclease catalytic domain Resolution 2.00

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		Q	N	P	L	I	L	V	D	G	S	S	Y	L	Y	R	A	Y	H	A	F	P	.	.	.	.	.	P	L	T	N	S	A	G	E	P	T	G	A	M	Y	G	V	L	N	M	L	R	S	L	I	M	Q	Y	K	P	T	H	A	A	V	V	F	D	A	K	G	K	T	F	R	D	E	L	F	E	H	Y	K	S	H
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.																										.	.
Template Conservation																																																					.	.
Template Sequence		Y	G	K	K	I	A	I	D	A	L	N	A	I	Y	Q	F	L	S	T	I	R	Q	K	D	G	T	P	L	M	D	S	K	G	R	I	T	S	H	L	S	G	L	F	Y	R	T	I	N	L	M	E	.	.	A	G	I	K	P	V	Y	V	F	D	G	E	P	P	E	F	K	K	K	E	L	E	K	R	R	E	A
Template Known Secondary structure		T	T																		S	B		T	T	S		B		B		T	T	S		B																	.	.	T	T										S					S	S		S	S	T	T
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.																								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	P	M	P	D	D	L	R	A	Q	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	H	A	M	V	K	A	M	G	L	P	L	L	A	V	S	G	V	E	A	D	D	V	I	G	T	L	A	R	E	A	E	K	A	G	R	P	V	L	I	S	T	G
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																		.	.	.	.
Template Conservation																																																							.																		.	.	.	.
Template Sequence		R	E	E	A	E	E	K	W	R	E	A	L	E	K	G	E	I	E	E	A	R	K	Y	A	Q	R	A	T	R	V	N	E	M	L	I	E	D	A	K	K	L	L	E	L	M	G	I	P	I	V	Q	A	P	.	S	E	G	E	A	Q	A	A	Y	M	A	A	K	G	S	V	Y	.	.	.	.	A	S	A	S	Q
Template Known Secondary structure		T	T													S											T	S	G	G	G	T															T							S	.	S													T	S	S	S	.	.	.	.					S
Template Predicted Secondary structure																																																							.																		.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.
		138	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	D	M	A	Q	L	V	T	P	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	D	S	L	L	F	G	A	P	R	L
Template Known Secondary structure		S	S					T	T		S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions