Return to main results Retrieve Phyre Job Id

Job DescriptionP00582
Confidence52.11%DateThu Jan 5 10:56:46 GMT 2012
Rank195Aligned Residues61
% Identity26%Templatec3udiA_
PDB info PDB header:penicillin-binding protein/antibioticChain: A: PDB Molecule:penicillin-binding protein 1a; PDBTitle: crystal structure of acinetobacter baumannii pbp1a in complex with2 penicillin g
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   675....680.........690.........700.........710.........720......... 730.... .....740.........
Predicted Secondary structure 

















...


..




Query SS confidence 






















































. . .




. .














Query Sequence  NLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAE. . . GKDIH. . RATAAEVFGLPLETV
Query Conservation 





 
   
  

  
 
  
  

 











 

 
  
  

  ...
 


..   
   

   
 
Alig confidence 





......
















............













...




..














Template Conservation      

......     
 

 

 


 ............
 

 



 


 
 

    

 


  



    
Template Sequence  EYKQIP. . . . . . PNFIHAFLAAEDSSFFQ. . . . . . . . . . . . NLSKEDILSLYVNKIFLGKNAYGIAAAAKIYYNKSINEL
Template Known Secondary structure 
GGGS
......SSS




............
TTT
B
STTBBSS

GGG
Template Predicted Secondary structure 

..................
















Template SS confidence 















































































   51..... ...60.........70... ......80.........90.........100.........110..
 
   750...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  TSEQ
Query Conservation 
   
Alig confidence 



Template Conservation 

 
Template Sequence  SIAQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 



   173...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions