Job Description P00582 Confidence 98.48% Date Thu Jan 5 10:56:46 GMT 2012 Rank 59 Aligned Residues 148 % Identity 16% Template c3u6fA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:three prime repair exonuclease 1; PDBTitle: mouse trex1 d200n mutant Resolution 2.30 Å

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		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380																					.	.	.	.	.	.	.	.																		.	390	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	V	F	A	F	D	T	E	T	D	S	L	D	N	I	S	A	N	L	V	G	L	S	F	A	I	E	P	G	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	I	P	V	A	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	D
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	T	L	I	F	L	D	L	E	A	T	G	L	P	S	S	R	P	E	V	T	E	L	C	L	L	A	V	H	R	R	A	L	E	N	S	Q	G	H	P	P	P	V	P	R	P	P	R	V	V	D	K	L	S	L	C	I	A	P	G	K	A	C	S	P	G	A	S	E	I	T	G	L	S	K	A	E	L	E	V
Template Known Secondary structure		S										S	S		G	G	G																						S	S	S								S	S											S	S											S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410			.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430					.	.	.	.	.	.				.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																					.	.												.										.	.	.	.							.	.	.
Query SS confidence																					.	.												.										.	.	.	.							.	.	.
Query Sequence		A	P	D	Q	I	S	R	E	R	A	L	E	L	L	K	P	L	L	E	.	.	D	E	K	A	L	K	V	G	Q	N	L	.	K	Y	D	R	G	I	L	A	N	.	.	.	.	Y	G	I	E	L	R	.	.	.	G	I	A	F	D	T	M	L	E	S	Y	I	L	N	S	V	A	G	R	H	D	M	D	S	L
Query Conservation																					.	.												.										.	.	.	.							.	.	.
Alig confidence																					.	.												.										.	.	.	.							.	.	.
Template Conservation
Template Sequence		Q	G	R	Q	R	F	D	D	N	L	A	I	L	L	R	A	F	L	Q	R	Q	P	Q	P	C	C	L	V	A	H	N	G	D	R	Y	D	F	P	L	L	Q	T	E	L	A	R	L	S	T	P	S	P	L	D	G	T	F	C	V	D	S	I	A	A	L	K	A	L	E	Q	A	R	K	S	Y	S	L	G	S	I
Template Known Secondary structure		T	T				S														T	S		S	S						T	T	T	T	T	T											T		S	S			S		T	T															T						S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	W	L	K	H	K	T	I	T	F	E	E	I	A	G	K	G	K	N	Q	L	T	F	N	Q	I	A	L	E	E	A	G	R	Y	A	A	E	D	A	D	V	T	L	Q	L	H	L	K	M	W	P	D	L	Q	K
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	R	L	Y	W	Q	A	P	T	D	S	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	G	N	V	L	T	L	L	S	I	C	Q	W	K	P	Q	A	L	L	Q
Template Known Secondary structure							S	S			S		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.																							.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions